result

Gene information

Detail information of AfisC1G01574

Location

Gene	Chr	Start	End	Strand
AfisC1G01574	chr1	264263957	264265032	+

Sequences

CDS

>AfisC1G01574
ATGTCTTTTAAAAATTTCAGTTTAACTCTTGTATTAATATCATCATTTTTCTTTCCATATGTGAACTCACTCTTTTTCAACATTTCACGTTTCGATCAAGGATCAAAATCTTTAATTGAACACCAAGGTGATGCGTTTATCAGTGGTGGTAGAATCAAACTCACAAAGGACAGCATAGGCTCAGCCAGCACAGGCAGAGCTCTATACAAACAAGAAGTTATTTTGTGGGATGAGAAATCCGGAGAACTTACGGACTTCATGACGCATTTCTCCTTCGTAATCAAATGCGTAAATGGAAACTTTTGCGGTGATGGCTTGACATTTTTCCTTGCAAAACACACTGCAACAATTCCTAAAGGCTCAGAAGGTGGCCTTCTTGCTTTATTTGCACCTCTAATTGATTTTAGCAGTCCCGATAATGGGGTTGTTGCTGTTGAGTTTGACACATTTAAGAATACATGGGACCGTTCCGCAAATCATGTAGGGATCGATGTCAACTCGATCGTTTCGGTTGCAAACGTTTCATTAAACAGTAGCATCAGCGACGGCCGAACTGCAAATGCATGGGTTACTTACAATTCAAGCACCAAAAATCTGTCAGTATTCCTGACATATGCTAAAAATCCAATCTATAGAGGAAATTCCATCCTCTCCTATAATATTGATTTGAGAGATGTTTTACCTTCACAAGTAGCAATTGGCTTTTCAGCTTCTACAGGTTTGTTAGCCGAGTCACATGAAGTCATATCTTGGAGCTTCAGGTCTAGACTCGAAGGAAAGACTGAGGATCCTAACAGCCATACAGTTGCAGAAAGTCCAAAAAAGGCAGAAAGCCCAACAGAGACGCCAGAAAAAGCTCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGAGAAGCCAAAAAGTCCTGAAGCTGCTAAAAGTCCAGAAATTTCGGAAAGTCCAGATAACACAAAGAAGACAGAAAACGGAGATAATATAGAAAACTCGGAGAATATAAACAAAAGCAATGTTGGACTAATAGTTGGTCTGGCAGCTTCAATCGGCGCAATACTGTTTCTCTGA

Protein

Gene

>AfisC1G01574
GAAAAATGTCTTTTAAAAATTTCAGTTTAACTCTTGTATTAATATCATCATTTTTCTTTCCATATGTGAACTCACTCTTTTTCAACATTTCACGTTTCGATCAAGGATCAAAATCTTTAATTGAACACCAAGGTGATGCGTTTATCAGTGGTGGTAGAATCAAACTCACAAAGGACAGCATAGGCTCAGCCAGCACAGGCAGAGCTCTATACAAACAAGAAGTTATTTTGTGGGATGAGAAATCCGGAGAACTTACGGACTTCATGACGCATTTCTCCTTCGTAATCAAATGCGTAAATGGAAACTTTTGCGGTGATGGCTTGACATTTTTCCTTGCAAAACACACTGCAACAATTCCTAAAGGCTCAGAAGGTGGCCTTCTTGCTTTATTTGCACCTCTAATTGATTTTAGCAGTCCCGATAATGGGGTTGTTGCTGTTGAGTTTGACACATTTAAGAATACATGGGACCGTTCCGCAAATCATGTAGGGATCGATGTCAACTCGATCGTTTCGGTTGCAAACGTTTCATTAAACAGTAGCATCAGCGACGGCCGAACTGCAAATGCATGGGTTACTTACAATTCAAGCACCAAAAATCTGTCAGTATTCCTGACATATGCTAAAAATCCAATCTATAGAGGAAATTCCATCCTCTCCTATAATATTGATTTGAGAGATGTTTTACCTTCACAAGTAGCAATTGGCTTTTCAGCTTCTACAGGTTTGTTAGCCGAGTCACATGAAGTCATATCTTGGAGCTTCAGGTCTAGACTCGAAGGAAAGACTGAGGATCCTAACAGCCATACAGTTGCAGAAAGTCCAAAAAAGGCAGAAAGCCCAACAGAGACGCCAGAAAAAGCTCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGAGAAGCCAAAAAGTCCTGAAGCTGCTAAAAGTCCAGAAATTTCGGAAAGTCCAGATAACACAAAGAAGACAGAAAACGGAGATAATATAGAAAACTCGGAGAATATAAACAAAAGCAATGTTGGACTAATAGTTGGTCTGGCAGCTTCAATCGGCGCAATACTGTTTCTCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256658.1	1.0e-70	L-type lectin-domain containing receptor kinase IX.1-like
Swissprot	A9YWS4.1	2.0e-39	Agglutinin LEC6
trEMBL	A0A5P1F8Z5	7.2e-71	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G10530.1	42.31	2e-33	140	LecRK-IX.1	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G01574	AT5G10530.1	260	131	10	6	258	8	255	42.31	2e-33	140
AfisC1G01574	AT5G65600.1	236	128	6	21	247	33	263	39.83	1e-28	124
AfisC1G01574	AT5G55830.1	259	154	10	43	285	47	298	31.66	2e-24	110

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	25	263	225.3	7.5e-67

Gene Ontology

Accession	Ontology	Name
GO:0030246	F	carbohydrate binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network