result

Gene information

Detail information of AfisC1G02864

Location

Gene	Chr	Start	End	Strand
AfisC1G02864	chr1	524871579	524875338	-

Sequences

CDS

Protein

Gene

>AfisC1G02864
ATGACGTTGAACATTGAGCAAGTGAGAACACTGGAAAAGAATTTTAAGGTTGGCAATAAATTAGAGCCAGAGAGGAAAATGCAATTGGCTAGAGCAATTGGATTACAGCCAAGGCAGGTTGGTATATGGTTTCAGAACAGAAGAGCAAGGTGTAAGACTAAGCAATTAGAGAAGGGTTATGATGTGCTTAAGAGGCAGGTCAATGTTATTGAATGAGAGAATTCAGCTCTTCAAGCTTAGAATAACAAGCTACAAGCTGAGGTAACTAATATGCCTGGTTATTACATACTTCAAAAGTAGAGCCAATATTTTATACTAACTTTTAAGTAGTTTTAATTGAACAGTAATAGCTATAAATGTTTTGGATGTAATTTGATTTTTAATTTAAAATATATAATTAATTTTGATATTTGGTTACTATAACTTATAAATAATAAATGTATACCACATTACGTGATTGGATATATCCATGTAAAATAATGGTGAATGTTCAATAGTGATATTTTGCTTATGGATTTTTTGAAAGAGCAATGTTACTTCAACCATACTTGATCAAAATTACATATGAAGTTATGTCATAAGTTATAAACTTCAAACTTACACCATAGAGAAAGTTGCAGATCCCTTTCCAGGCTTTTCTTCAACCACTTCAGAACCACCATCCCAAGTTCTCTCTGTAAGGACCTTTATTTCCTTAGCTAGCAATGTTAGTTGCCAAAGTTGCCTAAGAAAATCAAAGTAACATTTAAGATTTACAAGTATACAGCACAATCAAATATGTTTCAAATGATATATTTTTGGCTTGAGCCAGTTTTGGATACACTCGGAAAATTCAAAATAACCATGAAATGACCAATCACACAAAACTACATGCATACGCTATAGCCTAAACAGACCTCATCCCTGGTTTCGTTTATTAGGACAGACACCTGATAAAATTCACAACGCCTAAAAAATAAACTAGTACAACTGCACAACGGTGGAAAAACTGACCGTTTGAGTATATCATTGGAAATAATATTTATATTTGTTGCACTTTTAAATTAATTACATATTTAGTCATGTTTTTTCGTTTTCAGTGTAATCATGTGTGGTTAGTTTGAATATTTTTTATAACATTTACTTTTTTATTAGTTTGAACTTTTATTTATATTATTAATAAAAAAAAAAATTTGTAAAAGAAATTTATTTTAATAAAGAATAAATTTGTAAAAGAAGTTTATTTGTTAGATCGATATTAAGATTTGATAATATATGTAGATGGGCGTTTTGAGTTTTAAATGAGGTTTAATTTCTTGATCATATTTTTAATCGATATAAAGATTTGTTAATATCTATAGAGTTGTCGTTTTACACCTCTACTTATCTTTTATGTTAGATGAAAATTTTACAAACAGGCAAACAATAATAAAACAAGTAAAATTATCTTGTACTACTTCGTTTGAATCTATGATGGGATGGTCTATAGTCTTCTAGTTGGATCTATCGGAAGCTACCTGCTGCTACTCCTCTTGACTAAGCTAATAATCTCACTTGTAATTTTGACAACATCGAAGTTCCATGAGAATTTAAGATTGAATCTGCTTTGGCAACCATTAATTAAGTAAGAAATTTGCTTGGTGGATTAGGTTAAAATAATAATAATGTGGACTTAATATGTTCTGATAGTTCGAGATAGCTTTTTTATCTTCTAGCAATGTATGTTATTCATTTGATTTTACTAGTCATCCCGTATAAATGTTTTCTTCTTATAGTTGATCATGCAACCGCATTTCTTTAGGATGCTAGTAATCTTACCCTTGTAAATTTATTTAAAGTAAATAAAGCACCTTTTGTTTCAAAAAAAGGAAAGAAAATAAAGTTAGCTCAATAAATTTCTGTTTTCTACCCACACACACCATTCACTATGATACAATACATTTGGATTCTCCTAGATCATTATTTCTGAATCATTATATCCCAATTTAGTAATCAAGCTACCTCTTTGTAACCGTGGTTCAAGCAACAAACTTGTGTCTTACGTTCTATGTTGTAATGTATGAACTTTCCTCTAAATGATATTAATTTAGCATTTTACACCTCTACTTATCTTTTATGCATTTTCACGTACACTGTTGAAAATGAAAATCAGTGAACTCTTTTTCGAACCAACAGTGATATTATGTATTTTCTACATCATCCTCTATCGGTAAACATATCGCCTAGCTCTGACTTGGTTTCTAAGCCATTCACGTTTAACAAATTAGATATTATCACCTACACTTTAACTGTAGAAGGAAAGAAGTTTAGGCAATTGTTTGCACCTACTTGTAGATAATTACTAGTGGCTTCTTGTATATTTAAAAAAAATTGGTTTAAAGTAGTAGACAGACACTAGGAAAATTTAGGATGTGATTGTTGATAATTCTGCAATCAATCAGATGCTTATATACTAAAATATTGTAAAAGTTGTCTTTTAATACAAATGTTTGTGTTTTACTATTGCTAAATTTTGATTTCCAGCTGACATGGTCCGGTACTCTCGACGTGATCAAATTGTTTTACTACAACCTGTATAAGATATGCCAGCATACTAATTAATTGTGTTAGTTGCTTCATATCATATAATCTCAAATTTTGATCCCTCTCTAATAGACATCTGGATTCGCCCTGATTTACAATACCCTTTAAATACATTAAAATCCTTTTGGCAGCCTGGAAGTGAAGTTCATTAGATTATCCAAGCACCTGCTAATCAAACTTATAGTGAACAATATATCTAGATGAGTAATGTGAGATGCATCACATTTCCCACCATTTGTTTTAAATAAGTCTCCTCCGCTGTGACTCCATGATCATCTTTACTCGTTTTAAAACTTAGCTTAATCAGGCTACTTACTAACTTGGTTTCATCCATCCTAAAACATTTCAACACTTCGGTGGCATACCTTCTTTAACAAATGAAAATGCCATATGATTTATGTAATACCTAAATGGCAAGAAAGAATCTTACTTCTTAAACCAGTCATGTCCAAAGCTTGCATCATAGAGTTTTTAAAATTAGTCATCATATCCTCATCATCGCTAGTGTAAATCGGGTCAAGTTGATAAATAGTTAATATCAACCCATCACCTTTAGTGCTCCAGTTGGTGAAGAAAGTTTGCTCATCTAACTAATTACACTAATACATGTGAAAACTAGTACAGATTAAGTTCATCCTACTCACTCAAACCATATAGAACGATTGAAAAAATTCAAGATCAAATCAATATATTTCTAGCATCCTAACCTTTTTTTCATTTAGAATCTAAAACCTTCACTACGTTTCTACAACTTTAGCATCCTAAAAATAGCAATTGGTTCCCTAATTTGTCCCAAAATTATTACTTCGACTATCGAGTTTCTGTCCAGATTACTAATTCAACAAAAGAACACTCAAATCTCATGTAGAATTAAAGATAAAATATATCCACCAATTGTCACGCAATACCAAACAAGATAATAAAAGGCAAATGAAAATTACCAATTCAACAGACTAGACATGGGCGCTAACTTTAGTATCATACCTTTTATAATTAATCGATGGGGAAGAATCAAGCAGATCTGTAGATGTGCTAGGTGACGGAGGCAACGTAGTTGATGGCAGTGCTGGTTTCAGGTTTATCGGTGGTGGTTCAGTTTAGCAAGTCAGGCGGAACTGCATGTGCAATTGGTGGTGGGGGATACAGTTTGCTGTGTCGAGTCAAAGCACTGCGCGAGCTCAAAAGCTGTTCGGGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_016501170.1	3.7e-23	PREDICTED: homeobox-leucine zipper protein ATHB-13-like
Swissprot	Q8S7W9.1	4.7e-23	OsHox21
trEMBL	A0A1S4CIZ0	2.7e-23	Homeobox-leucine zipper protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69780.1	83.33	7e-29	122	ATHB13	Homeobox-leucine zipper protein family

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02864	AT1G69780.1	66	11	0	3	68	89	154	83.33	7e-29	122
AfisC1G02864	AT5G15150.1	65	14	0	3	67	119	183	78.46	9e-28	118
AfisC1G02864	AT3G01220.1	96	42	1	3	98	91	185	55.21	3e-26	113

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	3	52	54.5	6.6e-15

Gene Ontology

Accession	Ontology	Name
GO:0001558	P	regulation of cell growth
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009637	P	response to blue light
GO:0009651	P	response to salt stress
GO:0009740	P	gibberellic acid mediated signaling pathway
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0009965	P	leaf morphogenesis
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network