result

Gene information

Detail information of AfisC1G03650

Location

Gene	Chr	Start	End	Strand
AfisC1G03650	chr1	684399632	684402570	+

Sequences

CDS

>AfisC1G03650
ATGACTTGCTTTTCATGCCTTCTCAAGGGGAAAAGTCAGTTTAGTGCAGATGGCGATGAAGATATTTCAGGAATTGAAAATGTGAAGATATTCACTTATAAAGAATTGAGACGTGCAACAAATGATTTTTGCCTTGCTAGTAAAATTGGTGAAGGAGGTTTTGGACCTGTTTACAGGGGAACGCTTAAAGATGGGACAGTTGTGGCTATAAAAGCACTGTCGAAAGAGTCTAATCAAGGAAAAAGAGAGTTTTTGACAGAGATAAATGTAATCTCTAATATAGTCCATGAGAATCTTGCTGGATTATATGGTTGTTGTGCTGAAAAAGATAATAGAATTCTGGTTTACAATTATATTGAGAACAATAGCCTTGCTCAAACGCTTCTTGGTGCAAACCGTAGTGGCATCCAGTTCAGTTGGACAGTACGAACTAGAATATGCATTGGAATAGCACAAGGACTTAAATTCCTCCATGAGGAAGTTCGACCACATATAGTCCATCGTGATATCAAAGCAAGCAATATTCTTCTTGATATAAATCTCAACCCCAAAATTTCAGATTTTGGGTTGGCTAAGCTTCTACCTCCAAGTGTGACACATGTTAGCACTCGTGTTGCCGGAACAATAGGTTACTTGGCTCCAGAATATGCTATTCGAGGACAGGTAACACGACAATCAGATGTTTATGGATTTGGTGTTCTTCTATTGGAAATTGTGAGTGGAAGAAGCAACACAAACACAAGATTACCTTATGAAGAACAATTTCTCCTTGAAAGGACATGGGTACTATATGAACAAGGTAGACTTTCAAGAATTGTGGACACTGAAATAACTGAAGAATCAGAGATTGAAGAGGGATGCAAGTTCTTGAAAGTTGGTCTTTTATGCACACAAGATGGACCCAAGCTTCGCCCATCGATGTCAAAGGTTGTTAAAATGTTGAAAGGAGAGATTAATGTAGACCGTCTGAAAATTAGTAAACCAGGTTTGATCTCTGATTTCATGGATCTAAAAATTAGAAGCAATGATAAGTCGAATGATTCAAAAAATACAGCATCCTCTACGTTCTCTTTTGAAACTTCGCATGCAACTATGAGCTTCACTGCGATAAGCGACAGAGATTAG

Protein

Gene

>AfisC1G03650
GTGATGTCAAATTTCGCTGCTTTCATATTTACGCTCTTCCTTATCCTCGTTTATCTCATTTTTGCAACAGCCTTCTTTCAGGTATTTTCCTTTCTGATTTTCTCGGAGGCACTCGTTTTAGCCAAAAAGTTACAATCCTTTTCCCTATTTTAACATCCTATCCTTTTCCCCATTTATTAGGTTGGTTTTAGTGACCAGTACTTTGCGCCGTTTTCGTGTTTGAACTATTGCGAGCTTGGTCAGCATTTTTTCAGGTAATCTAATTTGTGCCTGTTCTTTATGTCCTTGTGTAAAATATTCATGACTTTGTAGCTATTTTTGTGCAGCGATTGATTTGGAAAGATATTAATTGTTACTTTGTTTTTTCGCACTTTTGGATACCTATTCGAGAAACAAGCTTCCGCTTTTTCCTTTTCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTAAAAAAAAAGAGAAAAGTGAAACAATTTTTGGAACACATTTAATGAATTTCGTCATCCATATCAAGCATAAAAAAACCACACTTTTATTTGTATTTTAGATATATCTTCTGGGCTAGCTTATTTAGTTGTCTAATTCGGGTAGAAATATTCAATAAGATTTATATTTGAATAACTTATATTGTAAGAACATATATTGTATCGTATTGGATTATAGCAGAGACTAGATATCTGTATGACATTATATTTCAGCATATAATAGTTATCTGATCAGTAGCACAATTATATGTGACAATTGAGTTGGAATATGTTTATATATAACTGAAAGTAGATTTCCTCAACTTCTTAGATACGCAACGCTATAGTTGAGACAAGCCAAGCTTTTAAAAGAGAGTAATGACTTGCTTTTCATGCCTTCTCAAGGGGAAAAGTCAGTTTAGTGCAGATGGCGATGAAGGTAGACGTCATAAAAGTTGTGCTATTATAGTTCACCTATTAATTTTATCATACTGATAGTGTAATATGTCGCAATTTTCACTTTCAGATATTTCAGGAATTGAAAATGTGAAGATATTCACTTATAAAGAATTGAGACGTGCAACAAATGATTTTTGCCTTGCTAGTAAAATTGGTGAAGGAGGTTTTGGACCTGTTTACAGGGTAACAATTTACTTTTGACATATTTGCAGAAGAGCATCGTACATAACATATGGTTTCTAATTACTTGTATTGGTTTAGGGAACGCTTAAAGATGGGACAGTTGTGGCTATAAAAGCACTGTCGAAAGAGTCTAATCAAGGAAAAAGAGAGTTTTTGACAGAGATAAATGTAATCTCTAATATAGTCCATGAGAATCTTGCTGGATTATATGGTTGTTGTGCTGAAAAAGATAATAGAATTCTGGTTTACAATTATATTGAGAACAATAGCCTTGCTCAAACGCTTCTTGGTAATTTCGTCTACTTCATTTTTTATTTCGTTGTACTTCTACGGAAGTAGCAACTAGATTTTCTGCACACAAATTAAAAATTTTGTAAGCAATTTTAAAATATTCATTCATTTCATAGCAATAATTATTCCCATTAGTGATCCTAAAATATCTTGAATATTTATTTGAGAGAAATGTTAGTTTGCAGTATTTTTGTCTGGACTTCATAATGGTACAAAATGCAGTTGGTATCTGTAGAGTTTGATGTGCAAATGTGGTGACTAATCTGAGCTCAAAATTGTTAAGTTCCATTAGTTTACAATGCACTATAGGATATTGCGGATTGTATGAGCACTCAAGTCCTTTTATATATCTTTTTTATTTGTCTTCATCTAAAATCCAGGGCGTTGTTGTCTTCTTGAGTATTCTAATAGAAATTACTAGCTAAAATGTTATAAGTTATTGCTGAGATGATGACTGAGAGCTATAGTAGTTTATAATATTTGAAGGGAGTAACATGAATCAAAGTCCAATTGAATTGCTTTCTTAGCTTAATGATTTATATAACAAACTTGATCATCAAAAAGGTGCATTACATATCAGTGTCGGTGTACCTATTACTAACCATCAACTTCATATAAACTAATATAGGTGCAAACCGTAGTGGCATCCAGTTCAGTTGGACAGTACGAACTAGAATATGCATTGGAATAGCACAAGGACTTAAATTCCTCCATGAGGAAGTTCGACCACATATAGTCCATCGTGATATCAAAGCAAGCAATATTCTTCTTGATATAAATCTCAACCCCAAAATTTCAGATTTTGGGTTGGCTAAGCTTCTACCTCCAAGTGTGACACATGTTAGCACTCGTGTTGCCGGAACAATGTGGGTTTATTATCCTTAGTAAACTCTTCCAACTTATTATTTTATTTTCTGAAATTAACCTAATCAGTTATACATATTTTTTTCAAATAGAGGTTACTTGGCTCCAGAATATGCTATTCGAGGACAGGTAACACGACAATCAGATGTTTATGGATTTGGTGTTCTTCTATTGGAAATTGTGAGTGGAAGAAGCAACACAAACACAAGATTACCTTATGAAGAACAATTTCTCCTTGAAAGGGTGAGTTACTTGCTTTACATGATTCTCATTCATCTATGCTGAGGTACGACTGCATGTCTAAATATAATAAGTTATGACTTGTATTTCAGACATGGGTACTATATGAACAAGGTAGACTTTCAAGAATTGTGGACACTGAAATAACTGAAGAATCAGAGATTGAAGAGGGATGCAAGTTCTTGAAAGTTGGTCTTTTATGCACACAAGATGGACCCAAGCTTCGCCCATCGATGTCAAAGGTTGTTAAAATGTTGAAAGGAGAGATTAATGTAGACCGTCTGAAAATTAGTAAACCAGGTTTGATCTCTGATTTCATGGATCTAAAAATTAGAAGCAATGATAAGTCGAATGATTCAAAAAATACAGCATCCTCTACGTTCTCTTTTGAAACTTCGCATGCAACTATGAGCTTCACTGCGATAAGCGACAGAGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269570.1	1.2e-146	LOW QUALITY PROTEIN: putative serine/threonine-protein kinase
Swissprot	Q93YN1.1	4.8e-129	Cold-responsive protein kinase 1
trEMBL	A0A5P1ELQ0	3.0e-144	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16670.1	68.21	1e-133	473		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G03650	AT1G16670.1	324	101	1	19	340	17	340	68.21	1e-133	473
AfisC1G03650	AT3G09010.1	331	150	4	3	330	5	333	53.17	3e-97	352
AfisC1G03650	AT1G53440.1	352	180	1	16	366	639	990	48.58	5e-95	344

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	46	312	157.0	5.1e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0042742	P	defense response to bacterium
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0004871	F	signal transducer activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0012501	P	programmed cell death
GO:0009506	C	plasmodesma
GO:0009751	P	response to salicylic acid
GO:0009861	P	jasmonic acid and ethylene-dependent systemic resistance
GO:0010193	P	response to ozone
GO:0045088	P	regulation of innate immune response
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network