result

Gene information

Detail information of AfisC1G05247

Location

Gene	Chr	Start	End	Strand
AfisC1G05247	chr1	956608137	956609447	-

Sequences

CDS

>AfisC1G05247
ATGAAATATGTAGTATTTTGTTTGATTAAAACAGAAAAGCAAATTCTACATCAAAGCGTTCTTGCCATAACAAGTGGAACAAGTCGCACAACAGGCCACACTTTTCTTCCATATAATCTTAATTTCAAGTCCAAGCGAGGTAAACCACTCTCTTTTTCGACTACTTTTGTGCTTCCAATTGCTGCAGAAGTGTCATCTGTTAGTGGTCAAGGCATGGCTTTTGTTATTTCCGAAAGCTCAAACTTTTCAACTGCTTCAGGTAGCCAGTATTTAGGGCTTTTTAATGAGAAAACTAATGGGCTTGTTGATAACCATGTTTTTGCTATTGAGTTTGACACATTATTAAGCCCTATCTTCAATGATATTGACGATAACCATATAGGAATCGATGTTAATAGCTTAAACTCTATAGCTTCACATTCAGTGGGTCATTATGATGATGAAACTGGTTTGATTACAAATCTGACTTTAAAAAGTGGGAAACCAATGCAAGTGTGGGTAGATTTTGATGGTGAAAGTATGCAACTTAATGTTACTATATCTCCTTTGCATATGGCCAAACCTAAAAAGCCACTTATATCCAATATTGTTAACCTTATGGATGTCATCACAAATTTTAGCATGCATGTTGGTTTCTCTTCAGCTACTGGTGCCTTTCGCTCTTACCATTTTGTTTTTGGATGGAGTTTAAAGATGAATGGTGTGGCGGATGCACTTGACTACATAAAACTTCCTTCAATTCCTAGACTTGGTCCAAAAAGAAATAAACATGTTCTGGTTATAGTACTTCCTATAGTTTCTTGTTTGACAGTGGTGTTAATTATTGTTGCATTTGCATTATTAATGCAAAGAAGGCTGAAATATGCCGAGTTAGTTGAGGATTGGGAGCTCGAATACAGGCCTCAGAGATTTTCGTACAAAGATTTATTCCAAGCGACAAAAGGCTTCAGCGAAAAAGATCTATTAGGCAGTGGAGGATTTGGCAGAGTTTACAAAGGCGTTTTTCCAAAATCAGGAGTAGAAATTGCAGTGAAGAAAGTATCCTGCAAATCAACACATGGCATGAAGCAGTTTGTTGCTGAAATTGTTAGTAACGGTCAGCTCTCTCACCGTAACCTTATACAACTTTTAGGCTACTGTAGGAGAAAAGGAGAACTGCTTTTATTCTATGATTTCATGCCTAATGGCAGCCACGATCGGTTCTTATATGATCAATCAAAACCAAGTCTAAACTGGGCACAACGATTTCGTATCATTAAAGGAGTGGCGGCTAGTCTTTATACTTGCATGAAGGTTGGGAGCAAGTTGTAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273983.1	1.1e-135	L-type lectin-domain containing receptor kinase IV.2-like
Swissprot	Q7XUN6.2	1.4e-119	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8J9J8	7.3e-134	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	48.66	6e-113	404	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G05247	AT3G53810.1	409	207	3	20	427	52	458	48.66	6e-113	404
AfisC1G05247	AT4G29050.1	411	211	4	18	426	46	454	47.69	1e-111	400
AfisC1G05247	AT2G37710.1	409	203	3	20	427	52	458	49.63	5e-111	398

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	16	244	224.0	1.9e-66
PF07714.14	Pkinase_Tyr	Domain	319	425	53.8	1.4e-14

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network