Gene information

Detail information of AfisC1G05976

Location

Gene	Chr	Start	End	Strand
AfisC1G05976	chr1	1092514916	1092515648	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	PIA52045.1	3.2e-49	hypothetical protein AQUCO_01000138v1
Swissprot	Q75LR7.1	9.7e-51	stress-activated protein kinase 1
trEMBL	A0A2G5E8H6	2.3e-49	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G10940.1	87.62	6e-53	201	ASK1;SNRK2-4;SNRK2.4;SRK2A	Protein kinase superfamily protein

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G05976	AT1G10940.1	105	13	1	105	77	181	87.62	6e-53	201
AfisC1G05976	AT1G60940.2	105	13	1	105	77	181	87.62	1e-52	200
AfisC1G05976	AT1G60940.1	105	13	1	105	77	181	87.62	1e-52	200

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	1	103	106.6	1.2e-30

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0042742	P	defense response to bacterium
GO:0005829	C	cytosol
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005985	P	sucrose metabolic process
GO:0006636	P	unsaturated fatty acid biosynthetic process
GO:0040007	P	growth
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009739	P	response to gibberellin
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010029	P	regulation of seed germination
GO:0019432	P	triglyceride biosynthetic process
GO:0046777	P	protein autophosphorylation
GO:0048366	P	leaf development
GO:0048527	P	lateral root development
GO:0070300	F	phosphatidic acid binding
GO:2000377	P	regulation of reactive oxygen species metabolic process
GO:0080022	P	primary root development
GO:0080167	P	response to karrikin
GO:1902456	P	regulation of stomatal opening

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network