result

Gene information

Detail information of AfisC1G06513


Location
GeneChrStartEndStrand
AfisC1G06513chr111818230331181823263+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrMQM17247.13.8e-28hypothetical protein
SwissprotA2ZH47.11.8e-27OsNS
trEMBLA0A843XDH42.8e-28Homeobox domain-containing protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G28610.175.713e-29 122PRS;PRS1;WOX3Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain66663.88.5e-18

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0001944Pvasculature development
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0008284Ppositive regulation of cell proliferation
GO:0009536Cplastid
GO:0009733Presponse to auxin
GO:0009908Pflower development
GO:0009942Plongitudinal axis specification
GO:0009943Padaxial/abaxial axis specification
GO:0009947Pcentrolateral axis specification
GO:0010067Pprocambium histogenesis
GO:0010078Pmaintenance of root meristem identity
GO:0010654Papical cell fate commitment
GO:0010865Pstipule development
GO:0043565Fsequence-specific DNA binding
GO:0048825Pcotyledon development
GO:0051301Pcell division
GO:0080167Presponse to karrikin
GO:0090451Pcotyledon boundary formation
GO:1902459Ppositive regulation of stem cell population maintenance

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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