result

Gene information

Detail information of AfisC1G07355

Location

Gene	Chr	Start	End	Strand
AfisC1G07355	chr1	1329833822	1329836636	-

Sequences

CDS

>AfisC1G07355
ATGAAAATATTACTATTAATTCTGCTGATTCCTTTGGTTCTCATGGCAGCTAAAGCAGATTTAGTTGAAGCTGGATCAGTTTGCAATGAAACATGTGGCAAATTTTCTATCGAATACCCATTTGGAATTCGTGAAGGATGCTATCGTGATGGCTTTAATATTTCTTGCAATCATACCGATGTCGTCTCCAAACCATACCTTTACAATACTGAGATTATTGGTATTTCAGTTCTCCCACCTCAAATTCGCATCTACAATTGGATTAGTTATGCTTGCTATAACATCAGTGGATTGCCTGACCGCGCTGGAACATATTATCTGAATTTCAGAGACACAATATATCGGTTTTCAGATGTTCATAATAAATTTACAGTTATCGGATGCAAAACTCTTGCATATATTCAAGATAATTCTGATGAAAGTGATCCATATATGAGCGGCTGTTTATCAATATGCAGTAGAAACAGCAGTGCCATGGATAAGGCTCCATGTTCAGGAATGGGTTGCTGCCAAACTTCAATTCCTAAAGGTATGACTTACTACGATGCAGAATTCGATGATGGGTTTAATCACAGCAGTGTTGTGGATTTTAGTCCATGTAGTTATGCATTTCTTGGCGATCAGGACTACATTTTCAATTCATCGGATGTTCATATGGATGAGTTCAGCAAAAGGAATAAGAAAGGCGTGCCTGTTACGCTTGATTGGGCTGTTGGAAACAGTACTTGTACAGAGTCAGTTCACAATAAGGATTATGCTTGTCGTAGTGAGCACAGCTATTGTGTGAATTCTGTTAATGGACCAGGTTATACTTGCAATTGTTCAATTGGTTTCCATGGAAATCCATATACACTAGGAGGATGCAGTGATATCAATGAATGTATAAACAAGACACAAAATAACTGCTATGGAGAATGTCATAATGTCGTGGGAAGTTTTACGTGTAAATGCCCATCTGGACATGAAGGAGACCCTTTTCAGCAAGGAGGTTGCCGACCAAAACCATTACTACAACTGCTACTTATAGGTGCGCTTAGCATTTTCTTGATCGCTGCTGTTGTTTATCTTGTATATGAAAAGACAAAATTGAGCAGAGCTAAACGAAACTGTTTTAGACAAAATGGAGGTCTACTATTGCAAGAACAAATCAGCGCACATCAATGTGTACGGTTCAAAATATTTCCTGCAGAAGAAATAAACAGAGCTACAAACAGCTTTCATGAAGCTCAAATTGTTGGACGTGGGGGCCAAGGCGTTGTCTATGAAGGAATTCTCGATGATAAGAGAAGGGTTGCCATTAAAAAGTCACTAATGATCGACGAGAAGAAAAAGAAAGAATTTGCCAAGGAAATGTACATACTTTCTCTCATCAATCATAAAAATGTGATTCAAATTTTGGGTTGTTGCTTGGAGGTTGATGTCCCTATGTTAGTGTATGAGTTCATATCAAAAGGCACACTTTACCAACTTATTCATAATAAAAATCAGTCCATGTCATATGGTTTACGACTGAAAATAGCTGCAGAGTCTGCATCAGCGCTTGCATATCTACATTCAGATGCTTTCCCTTCAATTGTTCATGGCGATATAAAGTCTTCAAACATTTTACTTGATGATGACTATAATGCAAAAGTTTCTGATTTTGGTGCTTCATTTTTGCCTCTAAATTATGTAAATGAAACCGGTGTACCTGGTACTTATGGTTACTTGGATCCAGAGAGCCTACAAACTGGTCAACTGACTGAAAAAAGCGATGTTTATAGCTTTGCAGTTGTAGTTTTAGAGCTTCTTATAAGGAAAAAGGCGGTTTATACAGATGCACTAGGTGAAAAAAAGAATCTTGCACAAACATTCATAGTTCAAGGTCTCGAAAAAATATTAGATGAAGAAATCAAGAATGAAATGAGTCGGAAGCAAATTATAGAATTCGAGGGAATGTTGAGGTTGAGTTTGAGAGAAGTTGGAGAAGAAAGACCCACTATGACTCAAGTGGTGGCATTTCTTCGAAGGATGAAGGATTCCAATAGCTCAGTGTTAGGGGAATGCAACTTTGAATATGCAAAGTATATGGATGGTGAATCGGGTTTGGACACACCTTATATCACATCTACATCTTCTTCTACGTTTTGTAGTTTAGATAGTCGAGCAGCTTTTCAATTTGATTCTAAGCTTACTAGATAG

Protein

Gene

>AfisC1G07355
ATGAAAATATTACTATTAATTCTGCTGATTCCTTTGGTTCTCATGGCAGCTAAAGCAGATTTAGTTGAAGCTGGATCAGTTTGCAATGAAACATGTGGCAAATTTTCTATCGAATACCCATTTGGAATTCGTGAAGGATGCTATCGTGATGGCTTTAATATTTCTTGCAATCATACCGATGTCGTCTCCAAACCATACCTTTACAATACTGAGATTATTGGTATTTCAGTTCTCCCACCTCAAATTCGCATCTACAATTGGATTAGTTATGCTTGCTATAACATCAGTGGATTGCCTGACCGCGCTGGAACATATTATCTGAATTTCAGAGACACAATATATCGGTTTTCAGATGTTCATAATAAATTTACAGTTATCGGATGCAAAACTCTTGCATATATTCAAGATAATTCTGATGAAAGTGATCCATATATGAGCGGCTGTTTATCAATATGCAGTAGAAACAGCAGTGCCATGGATAAGGCTCCATGTTCAGGAATGGGTTGCTGCCAAACTTCAATTCCTAAAGGTATGACTTACTACGATGCAGAATTCGATGATGGGTTTAATCACAGCAGTGTTGTGGATTTTAGTCCATGTAGTTATGCATTTCTTGGCGATCAGGACTACATTTTCAATTCATCGGATGTTCATATGGATGAGTTCAGCAAAAGGAATAAGAAAGGCGTGCCTGTTACGCTTGATTGGGCTGTTGGAAACAGTACTTGTACAGAGTCAGTTCACAATAAGGATTATGCTTGTCGTAGTGAGCACAGCTATTGTGTGAATTCTGTTAATGGACCAGGTTATACTTGCAATTGTTCAATTGGTTTCCATGGAAATCCATATACACTAGGAGGATGCAGTGGTTAGTATTATCCCTTTGACTTATCATATCTTATTAAAAGAATTAATTAGAAACAAATATCATGCTCTTGTAAAATTAGCAAAGATGTCCACTTTAATGTGAATATGGATATGAATGCTTGAATGTAAGAAGTTCAAATAGTTTGATAAGTTGAAAATCATTGCTGCTTTAATGATTATCTAATGCCTGTTGCAGCATGTGGTTTAAAATTAAAATTATCTGTTAACCCTCACCATAATTTGTTTAATTACGTTTATACAATTTGTTTGATTATGTTACGAACCCAAATGGACTGTTAAACTAAACTGGTAACTGATCATTTATGTGAATAATTGGCAAAACAGATATCAATGAATGTATAAACAAGACACAAAATAACTGCTATGGAGAATGTCATAATGTCGTGGGAAGTTTTACGTGTAAATGCCCATCTGGACATGAAGGAGACCCTTTTCAGCAAGGAGGTTGCCGACCAAAACCATTACTACAACTGCTACTTATAGGTATTTTTTTTAGCTAAACTAAGTTGATCCTATATTTTCTATGTTAATAATGTAAAACTGAAAATGACCATTAGTGAATTATGAAATCAAATGATCCATATCAATGGATGCACTTTAGTACTTTAGACAGCAACAAGGCTCAAATGCATCAATTGATCATGATCAGATACTTCGGATACGTTGTTTTTTGTGAGAAAGTATTTGTTCTTAGCAAGAGTTGCAAAATATAAATGTACACTTCTAAGTAACTTATCTTTCATTCTTTCTTTGTTTTTTTTTTAAATGTGCAGGTGCGCTTAGCATTTTCTTGATCGCTGCTGTTGTTTATCTTGTATATGAAAAGACAAAATTGAGCAGAGCTAAACGAAACTGTTTTAGACAAAATGGAGGTCTACTATTGCAAGAACAAATCAGCGCACATCAATGTGTACGGTTCAAAATATTTCCTGCAGAAGAAATAAACAGAGCTACAAACAGCTTTCATGAAGCTCAAATTGTTGGACGTGGGGGCCAAGGCGTTGTCTATGAAGGAATTCTCGATGATAAGAGAAGGGTTGCCATTAAAAAGTCACTAATGATCGACGAGAAGAAAAAGAAAGAATTTGCCAAGGAAATGTACATACTTTCTCTCATCAATCATAAAAATGTGATTCAAATTTTGGGTTGTTGCTTGGAGGTTGATGTCCCTATGTTAGTGTATGAGTTCATATCAAAAGGCACACTTTACCAACTTATTCATAATAAAAATCAGTCCATGTCATATGGTTTACGACTGAAAATAGCTGCAGAGTCTGCATCAGCGCTTGCATATCTACATTCAGATGCTTTCCCTTCAATTGTTCATGGCGATATAAAGTCTTCAAACATTTTACTTGATGATGACTATAATGCAAAAGTTTCTGATTTTGGTGCTTCATTTTTGCCTCTAAATTATGTAAATGAAACCGGTGTACCTGGTACTTATGGTTACTTGGATCCAGAGAGCCTACAAACTGGTCAACTGACTGAAAAAAGCGATGTTTATAGCTTTGCAGTTGTAGTTTTAGAGCTTCTTATAAGGAAAAAGGCGGTTTATACAGATGCACTAGGTGAAAAAAAGAATCTTGCACAAACATTCATAGTTCAAGGTCTCGAAAAAATATTAGATGAAGAAATCAAGAATGAAATGAGTCGGAAGCAAATTATAGAATTCGAGGGAATGTTGAGGTTGAGTTTGAGAGAAGTTGGAGAAGAAAGACCCACTATGACTCAAGTGGTGGCATTTCTTCGAAGGATGAAGGATTCCAATAGCTCAGTGTTAGGGGAATGCAACTTTGAATATGCAAAGTATATGGATGGTGAATCGGGTTTGGACACACCTTATATCACATCTACATCTTCTTCTACGTTTTGTAGTTTAGATAGTCGAGCAGCTTTTCAATTTGATTCTAAGCTTACTAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026657217.1	6.4e-173	LOW QUALITY PROTEIN: putative wall-associated receptor kinase-like 16, partial
Swissprot	Q9LMP1.1	2.8e-109	Wall-associated receptor kinase 2
trEMBL	A0A8B7CMA2	2.3e-164	putative wall-associated receptor kinase-like 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	39.16	5e-122	435	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G07355	AT1G21270.1	692	374	22	8	672	7	678	39.16	5e-122	435
AfisC1G07355	AT1G21250.1	703	383	22	1	672	1	683	38.26	1e-114	410
AfisC1G07355	AT1G21240.1	687	348	26	28	672	31	689	39.16	2e-114	410

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	27	130	89.1	2.8e-25
PF07645.12	EGF_CA	Domain	290	322	27.4	2.6e-06
PF00069.22	Pkinase	Domain	406	665	143.5	6.9e-42

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0006468	P	protein phosphorylation
GO:0009311	P	oligosaccharide metabolic process
GO:0009751	P	response to salicylic acid
GO:0009826	P	unidimensional cell growth
GO:0009992	P	cellular water homeostasis
GO:0016301	F	kinase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network