result

Gene information

Detail information of AfisC1G08200

Location

Gene	Chr	Start	End	Strand
AfisC1G08200	chr1	1499093681	1499096850	+

Sequences

CDS

>AfisC1G08200
ATGAAATCCCTCTGCGAAAGAGTATTAACTTCTACATTTCTCACACTGTTTCAGCTGTTAGCTGTTGTAGCTTCAACTTCAGCAGCATCAACAGTTTCAAAAAATTGCTCAGAAAAATGTGGAAACATGATCATCCCTTATCCATTTGGCATAATGGATGGATGTTTCCGCGATGGTTTCCAAATCCACTGCAATGAAAACACCGGCAAAGCAAGCACAATTGATAATAACGAAATCATCAATATATCAATTTCTCAAGCTCAAATGCGTGTCATTAACTCGATCAGCTTTGAGTGCAATTATCTAAAAGGAGGAAACAACCTAAGCTTCATTAGTTTTCTGGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACAAATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATGTTTGATCCTTATAGTCAAAGCAATCATTATACAAAAAATTCTGATTTAGTTGCTACTGGATGTATATCTTTATGCACCAACCAAAGTAGATTTGGGAACGATTCAACATGTTCAGGAGTAGGATGTTGTGAAGCAGCAATACCACCGGGGCTCTCATATTATTCTATACACTTCGATCCTAATTTTCGCAATAAAGATATCTGGGATTACAGTCCTTGCAGTTATGCGTTTGTTGCAGAAGAAGGGTCCTACAGCTTTCTTCAATCGGACATTGAAGGAGGAAAATTGGCCAGACGATATGAGCAGGCTCCTGTGGTGCTAGATTGGGTTTTAGGATATGAGACCTGTACAGAAGCAAAATTGAACAAGTCAGGGAACTATGCATGCGTTAGTTTGAACAGCACTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCAATTGCAGTCAAGGTTATGAAGGCAATCCTTATATCTATGGTGGATGCACAGATATCGACGAATGCAAAAATAAAACACTATGCTATGGAAACTGTACTAATCTACCAGGCAGCTATAGTTGTACATGCCAACTTGGATATGAAGGCTACCCGACAATACAAGATGGTTGCAGACCGAGACAGAAGAATCTAAGTATTCCAATCATCATACTCATAGTTGGTTTCAGCACTTTTCTCTTCAGTGCTGTTCTGTACACAACACTCGAAAAAGTAAAGCAAATTAGAGCAAAAGAGAAATGCTTTAAACAAAACGGAGGCTTACTGCTACAATCGCAGATAAACGCACATCAATCAGTGCGATTCAAGATATACTCAATAAAAGAAATCAGAAAGGCAACAGACAACTTCAATGAAAATTCCATTTTAGGCAGGGGTGGCCAGGGAATAGTCTTCAAAGGAATTACATATAACAATACGAAAATTGCCATTAAAAAGTCTATCGTAATAGATGCAAAGAGAATGAAAGTGTTTGCGAAGGAAATGTATGTACTATCTCTCATAAACCACAAAAACGTGATTCAAATTTTAGGCTGCTGTCTAGAAGTAGAAGTTCCAATCTTAGTGTATGAGTATATACCTAGAGGTACATTGTACCAGCGCATTCAGTCTAAGGATCAAAATATGTCATTGAGTTTTCGGCTTAAGGTTGCCATTGAGACTGCATGTGCACTAGCCTATTTACATAAAGATTCTCACCCTTCAATAATTCATGGGGACATTAAATCTTCAAACATATTACTGGATGAAAATGATGTGGCAAAAGTATCTGATTTTGGAGCTTCTATGTACCCTCTTAAAGAAGTAAATGATACGGGTGTACCTGGTACGTACGGGTATTTAGATCCAGAGAGCTTAGTTACGGGTCAACTTACTGCAAAGAGCGATGTATTCAGTTTTGGAGTGGTTGTTCTAGAACTATTGACAAGGATTAAGGCAGTGTATTTCGAGGAGTCTGGAGAAAAAAAGAACTTGTCACTTAGATACAAAGAGGAAGGGTTAGAAAGACTTCTAGATGATGAAATCAAGCACAGGATGCCTAAAGAGCAAATATTAGAACTCTCAGAACTTTTGACCGCGTGCTTAAAAACCTACGGAGATGAAAGACCGACAATGACAAAAGTAGTAGCATGGCTGCATAAAGTGAGAGAATATGATCGGAACTTGATTTCAGATGACAAAATTGATCCAATTATATTGTCTGTAAACGCAGAAGGAAGCAACCGTGGTACCAACGTGCCCGACTATTATAGTTCAGGTGACCAAGCGGCAATGATATTAGACTATCGCCTTACTAGATAG

Protein

Gene

>AfisC1G08200
CTCACGCTCTTATATAAACACACAATTTCTTCACTTCCTTTTCAAACTCGTACTCAGCAATGAAATCCCTCTGCGAAAGAGTATTAACTTCTACATTTCTCACACTGTTTCAGCTGTTAGCTGTTGTAGCTTCAACTTCAGCAGCATCAACAGTTTCAAAAAATTGCTCAGAAAAATGTGGAAACATGATCATCCCTTATCCATTTGGCATAATGGATGGATGTTTCCGCGATGGTTTCCAAATCCACTGCAATGAAAACACCGGCAAAGCAAGCACAATTGATAATAACGAAATCATCAATATATCAATTTCTCAAGCTCAAATGCGTGTCATTAACTCGATCAGCTTTGAGTGCAATTATCTAAAAGGAGGAAACAACCTAAGCTTCATTAGTTTTCTGGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACAAATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATGTTTGATCCTTATAGTCAAAGCAATCATTATACAAAAAATTCTGATTTAGTTGCTACTGGATGTATATCTTTATGCACCAACCAAAGTAGATTTGGGAACGATTCAACATGTTCAGGAGTAGGATGTTGTGAAGCAGCAATACCACCGGGGCTCTCATATTATTCTATACACTTCGATCCTAATTTTCGCAATAAAGATATCTGGGATTACAGTCCTTGCAGTTATGCGTTTGTTGCAGAAGAAGGGTCCTACAGCTTTCTTCAATCGGACATTGAAGGAGGAAAATTGGCCAGACGATATGAGCAGGCTCCTGTGGTGCTAGATTGGGTTTTAGGATATGAGACCTGTACAGAAGCAAAATTGAACAAGTCAGGGAACTATGCATGCGTTAGTTTGAACAGCACTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCAATTGCAGTCAAGGTTATGAAGGCAATCCTTATATCTATGGTGGATGCACAGGTATATTAATTAAATGACCTCTTTGTATTAGCTCGTAATCTTTATACGTTGAATCAGAGTGAAATGTTTGCGTTTATTGCTGCGGATAGATATCGACGAATGCAAAAATAAAACACTATGCTATGGAAACTGTACTAATCTACCAGGCAGCTATAGTTGTACATGCCAACTTGGATATGAAGGCTACCCGACAATACAAGATGGTTGCAGACCGAGACAGAAGAATCTAAGTATTCCAATCATCATACTCATAGGTACATAAATAAATTATCTCACTTTATTTAAACTGTATATTGTACTGAAATCCCAAAGCTTAAAGCTATTATGCTCTCTTGCATTTTGTGCCAAGGTACGTAGAGTTGGAGATATTTGGAAAGAAATAATCAAATAACACGAATTATTTTACCTGAAATTAATGACATAATCATCATGCTAGACCGACAGGAAAACAGTTCATCCTTTCTTTATCAACTGTAGCAATACAATCTGTGGATAGATATGTCATATACTGAACTAGTAATACATTTATGCAGTTGGTTTCAGCACTTTTCTCTTCAGTGCTGTTCTGTACACAACACTCGAAAAAGTAAAGCAAATTAGAGCAAAAGAGAAATGCTTTAAACAAAACGGAGGCTTACTGCTACAATCGCAGATAAACGCACATCAATCAGTGCGATTCAAGATATACTCAATAAAAGAAATCAGAAAGGCAACAGACAACTTCAATGAAAATTCCATTTTAGGCAGGGGTGGCCAGGGAATAGTCTTCAAAGGAATTACATATAACAATACGAAAATTGCCATTAAAAAGTCTATCGTAATAGATGCAAAGAGAATGAAAGTGTTTGCGAAGGAAATGTATGTACTATCTCTCATAAACCACAAAAACGTGATTCAAATTTTAGGCTGCTGTCTAGAAGTAGAAGTTCCAATCTTAGTGTATGAGTATATACCTAGAGGTACATTGTACCAGCGCATTCAGTCTAAGGATCAAAATATGTCATTGAGTTTTCGGCTTAAGGTTGCCATTGAGACTGCATGTGCACTAGCCTATTTACATAAAGATTCTCACCCTTCAATAATTCATGGGGACATTAAATCTTCAAACATATTACTGGATGAAAATGATGTGGCAAAAGTATCTGATTTTGGAGCTTCTATGTACCCTCTTAAAGAAGTAAATGATACGGGTGTACCTGGTACGTACGGGTATTTAGATCCAGAGAGCTTAGTTACGGGTCAACTTACTGCAAAGAGCGATGTATTCAGTTTTGGAGTGGTTGTTCTAGAACTATTGACAAGGATTAAGGCAGTGTATTTCGAGGAGTCTGGAGAAAAAAAGAACTTGTCACTTAGATACAAAGAGGAAGGGTTAGAAAGACTTCTAGATGATGAAATCAAGCACAGGATGCCTAAAGAGCAAATATTAGAACTCTCAGAACTTTTGACCGCGTGCTTAAAAACCTACGGAGATGAAAGACCGACAATGACAAAAGTAGTAGCATGGCTGCATAAAGTGAGAGAATATGATCGGAACTTGATTTCAGATGACAAAATTGATCCAATTATATTGTCTGTAAACGCAGAAGGAAGCAACCGTGGTACCAACGTGCCCGACTATTATAGTTCAGGTGACCAAGCGGCAATGATATTAGACTATCGCCTTACTAGATAGACTTTCTTAGTAAAAATATATGTATATTGTATTCTAAGTGTCCAAGTACAAAATAACAAAGCCCTGGTCAAATTTAGGGTAGTCGTCTCTAAATGCAGGGGTTGATATTGGAATAAAAATAAAAATAAGGAGATCGTCTAGAACTGTAATTTGCTGAAGCATTCCCTGTTACAGGGGATATTATAAGTTAGAGCTATCCCAATGGTATTGTAATATGTAATGGTATTGTAATGTGTATGTATTTCGCTCGAAGTATATTAAAAAGTGTAATGTTATGACTTCGAACTTTGAACCATGCCTATTTTATATTAATGTGTTGGTTATATATAAGCGAGTACATGCAGGAGATTACACCATAATATTTGACCAAAGTTTGACCTTTTGCTCTATTCCTTGATTCACAATGTATATGTGTACATATGTTTCGAATGTTAAGCCAAGATTTGGGTGTTGGTATGCGTGCTTATAAAAAAATGCAGTCACGCAATCAAAACTGAACATGCTAAAGGTTAGTTTTCCC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009401089.2	3.7e-152	PREDICTED: putative wall-associated receptor kinase-like 16
Swissprot	Q9LMN7.1	1.9e-105	Wall-associated receptor kinase 5
trEMBL	A0A8B7CMA2	1.3e-154	putative wall-associated receptor kinase-like 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21230.1	38.47	4e-114	409	WAK5	wall associated kinase 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G08200	AT1G21230.1	681	368	24	35	690	28	682	38.47	4e-114	409
AfisC1G08200	AT1G21250.1	702	396	20	13	690	9	683	36.32	6e-114	408
AfisC1G08200	AT1G21240.1	715	384	23	13	690	8	689	36.50	1e-113	407

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	34	137	82.6	2.8e-23
PF07714.14	Pkinase_Tyr	Domain	427	684	144.7	2.7e-42

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0006468	P	protein phosphorylation
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0044710	P	single-organism metabolic process
GO:0044763	P	single-organism cellular process
GO:0044767	P	single-organism developmental process
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network