result

Gene information

Detail information of AfisC1G08518

Location

Gene	Chr	Start	End	Strand
AfisC1G08518	chr1	1553710434	1553711839	+

Sequences

CDS

Protein

Gene

>AfisC1G08518
CAACAATGGGATCGCTCCACAAAACAGAACTAACTTTGGCATTTTTGACGTTGTTTCAGCTGCTAACTGCTGCAACTTCAACTTCAGCAGCATCAGAAAACTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTCCAAATCAACTGCAATGAAAAAACCGGTACAGCAACCACAATTGATGGTGTCGAAATTATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAACTGGATCGGCTTTTCTTGCATACATCCAAAAGGAGGAAATAACCAAAGCTACCGCAGTTTTCTGGGCATAAGCGACCGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCCGATCCTTATACTCAAAGCAACCATTATACAAATGATTCTGATCTATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATGATTCACCATGTTCAGGAGTAGGATGTTGCCAAACAACTATACCAGAAGGACTCTCATATTATGAAATAAGATTCGATCCTGGATTTTTCAATAAAGCTATCTGGGACTACAGTCCTTGCAGCTTTGCATTTCTTGCAGAAGACGGCTTCTATAGCTTTCTTCAATCTGATACCGAAAGAAGCAATTTGCTCAGGCGATTCGAGCAGGCTCCTGTGGTGCTAGATTGGGTTGTAGGAAATGAAACTTGTAAAGAAGCAAAATCGAACAAGTCAGGGAACTATGCATGCGTTAGTTTGAACAGCACTTGTAAGGACTCTCAGAATGGGCCAGGTTATACATGCGTTTGTAGTCAAGGTTATGAAGGCAATCCTTATGTCCATGCTGGATGCACAAATTATCAGTAATTAATGTGTCTTTACTAAACGCATGGAGGTGTTGGTATATATTCTTAATAATGTTGGAATATGGAAGTTCGTCCTGAAATATACCATGTATAAGAATAAAGGCACTGGCTGCTATAACTGTTATTATCATAATTATTCATTTTGAGTCCAATATACGTCTTTCATATTCCTATGTTACCAATTTTTTTGCGAGTAGATGCTGGAGAGGGGGGTGCTTTACACTGTAATATTTGACCAAGTTTTCATCAGTGCTCGTCGTCTTGATTTACACGCTATCAAGATTCAAAATTGAATTTCCCAGTTTGATCACAATAATTGTTTACTAGTACAATCTTGAGAAACCGACCGTTAAAATGTGCAATATTAACAAAAAAAAAGGGTAAACTTTTATAATTTTAATTAAATGTATAATTATGATATGTTTAACAAGAAAAATATTTGCATCATATAACACATTTGTCATACTTTAAAGCTACACAATTC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009401089.2	6.8e-60	PREDICTED: putative wall-associated receptor kinase-like 16
Swissprot	Q9LMP1.1	6.0e-37	Wall-associated receptor kinase 2
trEMBL	A0A4V4H4Z2	6.4e-60	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	33.77	7e-37	151	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G08518	AT1G21270.1	305	167	12	6	303	2	278	33.77	7e-37	151
AfisC1G08518	AT1G21250.1	278	150	11	31	303	30	282	35.25	5e-35	145
AfisC1G08518	AT1G21230.1	294	164	11	16	303	12	279	33.33	4e-34	142

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	31	134	90.9	7.2e-26

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005623	C	cell
GO:0016043	P	cellular component organization
GO:0044238	P	primary metabolic process
GO:0044763	P	single-organism cellular process
GO:0044767	P	single-organism developmental process
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network