result

Gene information

Detail information of AfisC1G08519

Location

Gene	Chr	Start	End	Strand
AfisC1G08519	chr1	1553720349	1553721418	+

Sequences

CDS

Protein

Gene

>AfisC1G08519
CAACAATGGGATCGCTCCACAAAACAGAACTAACTTTGGCATTTTTGACGTTGTTTCAGCTGCTAACTGCTGCAACTTCAACTTCAGCAGCATCAACAGCTTCAGAAAACTGCTCAGAAAAATGTGGCAACATGACCATCTCCTATCCATTTGGCATTAAAAATGGATGTTTCCGCGATGGTTTCCAAATCAACTGCAATGAAAAAACCGGTACAGCAACCACAATTGATGGTGTCGAAATCATCGATATATCACTTTCTCAAGCTCAAATGCGCGTCTACAACTGGATCGGCTTTTCCTGCATACATCCAAAAGGAGGAAATAACCAAAGCTACCGCAGTTTTCTGGGCATAAGCGACGGGCGATACAGACTTTCACACACACGCAACATATTTACTGCAGTGGGATGCCAGACTCTTGCAACTATATCCGATCCTTATACTCAAAGCAACCATTATACAAATGATTCTGATCTATTTGCTACTGGCTGTATATCTTTATGCACCAAACAAAGTAGAATTGTGAATGATTCAGCATGTTCAGGAGTAGGATGTTGCCAAACAACTATACCAGAAGGACTCTCATATTATGAAATAAGATTCGATCCTGGATTTTTCAATAAAGCTATCTGGGACTACAGTCCTTGCAGCTTTGCATTTCTTGCAGAAGACGGCTTCTATAGCTTTCTTCAATCTGATACCGAAAGAAGCAATTTGCTCAGGCGATTCGAGCAGGCTCCTGTGGTGCTAGATTGGGTTGTAGGAAATGAAACTTGTAAAGAAGCAAAATCGAACAAGTCAGGGAACTATGCATGCGTTAGTTTGAACAGCACTTGTAAGGACTCTCAGAATGGGCCGGGTTATACATGCGTTTGCAGTCAAGGTTATGAAGGCAATCCTTATGTCCATGGTGGATGCCCAAATTATCAGTAATTAACGTGTCTTTACTAAACGCATGGAGGTGTTGGTGTTCTTAATAATGTTGGAAGATGGAAGTTCGTCCTGAAATATACCATGTATAAGAATAAAGGCACTGGCTGCTATAACTGTTATTATCATATATTATTCATT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009401089.2	9.9e-59	PREDICTED: putative wall-associated receptor kinase-like 16
Swissprot	Q9LMP1.1	6.1e-37	Wall-associated receptor kinase 2
trEMBL	A0A4V4H4Z2	7.9e-58	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	33.77	2e-36	149	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G08519	AT1G21270.1	308	166	13	6	306	2	278	33.77	2e-36	149
AfisC1G08519	AT1G21250.1	310	171	11	6	306	2	282	32.58	1e-34	143
AfisC1G08519	AT1G21230.1	306	166	13	10	306	5	279	32.68	3e-34	142

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	34	137	91.1	6.6e-26

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005623	C	cell
GO:0016043	P	cellular component organization
GO:0044238	P	primary metabolic process
GO:0044763	P	single-organism cellular process
GO:0044767	P	single-organism developmental process
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network