result

Gene information

Detail information of AfisC1G08883

Location

Gene	Chr	Start	End	Strand
AfisC1G08883	chr1	1630024597	1630025013	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020580039.1	4.0e-26	serine/threonine-protein kinase AtPK2/AtPK19-like
Swissprot	Q39030.2	2.3e-26	Ribosomal-protein S6 kinase homolog 2
trEMBL	A0A8T3ANZ6	2.9e-26	Serine/threonine-protein kinase AtPK2/AtPK19

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G08720.1	68.67	2e-29	124	ATPK19;ATPK2;ATS6K2;S6K2	serine/threonine protein kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G08883	AT3G08720.2	83	26	3	85	237	319	68.67	2e-29	124
AfisC1G08883	AT3G08720.1	83	26	3	85	237	319	68.67	2e-29	124
AfisC1G08883	AT3G08730.1	83	27	3	85	231	313	67.47	1e-28	120

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	3	84	65.4	4.5e-18

Gene Ontology

Accession	Ontology	Name
GO:0001501	P	skeletal system development
GO:0001556	P	oocyte maturation
GO:0001818	P	negative regulation of cytokine production
GO:0002035	P	brain renin-angiotensin system
GO:0002223	P	stimulatory C-type lectin receptor signaling pathway
GO:0005829	C	cytosol
GO:0004711	F	ribosomal protein S6 kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005654	C	nucleoplasm
GO:0005819	C	spindle
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0007411	P	axon guidance
GO:0007417	P	central nervous system development
GO:0007507	P	heart development
GO:0008134	F	transcription factor binding
GO:0008285	P	negative regulation of cell proliferation
GO:0009409	P	response to cold
GO:0009651	P	response to salt stress
GO:0010659	P	cardiac muscle cell apoptotic process
GO:0045727	P	positive regulation of translation
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0030307	P	positive regulation of cell growth
GO:0031965	C	nuclear membrane
GO:0032793	P	positive regulation of CREB transcription factor activity
GO:0033129	P	positive regulation of histone phosphorylation
GO:0035066	P	positive regulation of histone acetylation
GO:0035175	F	histone kinase activity (H3-S10 specific)
GO:0043027	F	cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043065	P	positive regulation of apoptotic process
GO:0043154	P	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043555	P	regulation of translation in response to stress
GO:0043620	P	regulation of DNA-templated transcription in response to stress
GO:0043987	P	histone H3-S10 phosphorylation
GO:0043988	P	histone H3-S28 phosphorylation
GO:0043990	P	histone H2A-S1 phosphorylation
GO:0045597	P	positive regulation of cell differentiation
GO:0045835	P	negative regulation of meiotic nuclear division
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter
GO:0051092	P	positive regulation of NF-kappaB transcription factor activity
GO:0060047	P	heart contraction
GO:0070498	P	interleukin-1-mediated signaling pathway
GO:0070613	P	regulation of protein processing
GO:0071322	P	cellular response to carbohydrate stimulus
GO:0072574	P	hepatocyte proliferation
GO:2000491	P	positive regulation of hepatic stellate cell activation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network