result

Gene information

Detail information of AfisC2G00682

Location

Gene	Chr	Start	End	Strand
AfisC2G00682	chr2	95685636	95688268	-

Sequences

CDS

Protein

Gene

>AfisC2G00682
ATGGAGTACCAAGCAAATAAAAATGAAAAGCCATGGCTACTGATATTGCTCTTCATCATATCCATATTAGTAAGCATGATGGGCTATCCACCGATGAAGAAGCCAAGCTCAAGCTCAAGCTGGACTGCAAAGGCAGTAAAGGAGGCAGAGGCAGTGGCCGCAATAGACTGCTCCGGGCATGGCAGAGCTTACTTGGACGGAATCGTCGTCCATGGAGCTCCCATGTGCGAGTGCAACACTTGCTACACCGGTCCCCATTGCTCCACTTTGCTCCCTAACTGCTCCTCTGATGTTGTAAGCGGCGACGCTTTGTTTCTCGAAAAATATTGGATGCAACACAAATCCAATGCCGCTCTTCTCATATCACCCTGGCATAGAATGAGCTATTTCTTCCAGCCATCTTCCAGCAATATCATCAACGCCGAGCTTGAAAAACACGTCAGACTTTTACATCAGGCCGTCGGTAATGCCAAAGCCGATGACAAGTACATCGTCTTCGGTACCGGCGTCACTCAACTCCTCAACGGTCTAGTCATCGCCCTTTCCCCAAACGATATATCACCCGATGTGCAACCATCAAAAGTTGTCGCTACCGTCCCTTACTATCCCGTCTTCAGAAAGCAAACCAAATTCTTTCGTTTTACCGGCTACGAATGGAAAGGGAACGCATCCGATTACGTTAACGCCGCTTCTCCTCAAAACATCATAGAATTGGTGACTTCGCCCAATAATCCCGAAGGTCGATTTCACCATTCCATTATCAATGGCTCTTTAGCAATCCACGACCACGTCTACTATTGGCCGCATTATACCCCAATTGCACAACCCGCCGACGAAGATATCATGTTGTTTTCCATGTCCAAATACACTGGACATTCCGACAGCAGATTCGGGTACGACGGTCTTTTTTATATTTTCTTTTTCTTCTTAACTTTATTTCATATATATACTGTCAACGGTGGTCTGCATCATTCATGCATGCTAATTATTAACAAATTACATATTGTATGTACAAGTGGGCGCTCATAAAGGACGTGAAAGTATACGACAGGGTAATGGAGTACATGACCGAGAACACGGAAGGAACTTCCCACGATACGCAACTTCGAACCTTGAAACTAATAAAGGAGATCTTGTTGCAAATGAAAACGAAACGGGAAACAATGGCCGACATCAACCAATTTGGCTATCAAACATTGTCTAAAAAATGGGCTGAACTTACCAAGCTAGTTGCATCTTCAGATCGATTCTCCCTTCAAAACCTCTCTCCCCAATATTGCAACTACTTCAAAAAAGTTAGAGATCCCTCACCATGTATGTTCCTAGCTAGCTACTTAATTAATTTCTCTAACTTTGTTCGTTTATATCTTCAAACCGACTGCATATATACATGCTTAATGCAATTGCTAATTTACATCAATTAATCGCAGCATTCGGATGGCTAAAGTGTGAATGGGAGGAAGACATGGATTGTGAAGCTCTACTCAGGACACTACTAAAAAACTTTGAATTAAAGACCGAAAATATCAGTCTTTAATTAAGTAATTCGGTCTTTAAATTACGTTTAAAGACCGACTAAAGACTGAAGATTTCAGTCGCTGATCCTCAAGTCCCAAAAAATGTTTTAGACTGAAAATTCGGTCTTAAAACATAAAGACCGAGTTTCGGTTTTAAATCGTTTTAAAGACTGGATTTTAATGACCGAAATGTGGTATCTAATCAGTCTCTAATCACTAATATATTTAAAATTTAACATCTGTAATTCATATACATATGTGGATATATTAAATTATTTATAAGCTTTCATCACAGTACATTTTTGTTCATGTCTTTCAAAATTTAGAAACTTTTTATCTCTCAAAAAAGTTGAAAGGCCATGATAGAAACTCTTGACGCATATACAAAGTGCAACGATATAAGCATAACCATTACATATACAACTTACAAAATTATATAAAATGTACAAACTCGGCCTTAACAGGCAGCCTACAAAATTATTTAAAATGTACAAACTCTGCCTTAATAGACAACCTACAAAATTATTTGAAATGTAAAAACTCAGCTTTAATAGGCGGCCTAATCACCCAACCCTCTCCTAATTTTACAAATCCAAATGGCATTTACCCAGCCATTCATGTGATTCAACTTTAGCCAAAATGTTCATTTTACTGTGTTGCTCAATGATGCGCTAATAAACAACAATGATAATGCCCACCATTATCTGCCAGGATGACAGCTTTTTCTAGGAAATCCAAGACGTAATGCAATTAGAGTGTGATGCATAATCCATCCCTTTATTTACTATTGATAGAAAATGATAGAGCCTTCAATGAAACCCACACTACTTAGACTATCCCCAATATCCAACCCACACTACTTAGAGTATTCTCAATATCCAACTTACCCTTGCCAGTTGTTGTGCGGCATAAGATGTATGTAGGCCTGATATATTAAAAATTCCACCTCGTGCTTGCCATTCTGAATTTCTCTCATCAACTAGGTTAGAGGGAAAATGTTGTACCCTTTATTAAAAGCATACAGCACTGGAATGCGAGGAACTGAACCAAATGATAAGCCCTAGAAATCACTACTACGCTAGGAAAGTCGCCAAGTCCAATAGCACAGCTACTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	BAD06448.1	7.7e-147	alliinase-like
Swissprot	P31757.2	2.0e-128	Cysteine sulphoxide lyase
trEMBL	Q76BK3	5.5e-147	Alliinase-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	41.90	4e-90	328		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G00682	AT1G34060.1	401	199	10	16	391	6	397	41.90	4e-90	328
AfisC2G00682	AT1G34040.1	400	188	10	13	391	13	395	43.50	5e-86	315
AfisC2G00682	AT1G23320.1	314	168	9	95	387	22	324	36.31	1e-55	214

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	40	94	98.5	1.8e-28
PF04864.10	Alliinase_C	Domain	97	387	424.7	2.3e-127

Gene Ontology

Accession	Ontology	Name
GO:0043231	C	intracellular membrane-bounded organelle
GO:0009888	P	tissue development
GO:0009605	P	response to external stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009851	P	auxin biosynthetic process
GO:0009908	P	flower development
GO:0016846	F	carbon-sulfur lyase activity
GO:0044425	C	membrane part
GO:0044444	C	cytoplasmic part
GO:0048364	P	root development
GO:0048825	P	cotyledon development
GO:0070529	F	L-tryptophan aminotransferase activity
GO:0070546	F	L-phenylalanine aminotransferase activity
GO:0070547	F	L-tyrosine aminotransferase activity
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network