result

Gene information

Detail information of AfisC2G01402

Location

Gene	Chr	Start	End	Strand
AfisC2G01402	chr2	195143128	195146886	+

Sequences

CDS

>AfisC2G01402
ATGCTCCGCCGATTCGCGAGGGTATTCCTCGCCAGTTCTCTAGCTTTCCTCCTCCTAGTTCTCTTCTCCTCCGCTCAAAACCCTAGTCTTCAGCTATCCGCACTTGTTGGGTTCAGAAATTCAGTTTCGGATCCTCACAATCTTCTGTCCAGTTGGTCTAGCTCGAACATATGTACTTGGTTTGGTGTTACGTGCGATTTAGAATATAGAGTTGTTGCCATTAACATAACAGGTAACGGTAAGCAGAAGTTTAGTGGTAAGCTTAACCCTGAGCTTGGCAACTTGGCGGAGCTCAGTGTACTCTCGATTCGGTCCCAGTCACTTCACGGCGAGATTCCCGACGAGATCTGGAAGTTACCAAAGCTCGAAGTGTTGAATTTGGAGGGCAATACTCTGTCCGGTCAACTACCTTTTAAATTTAAAGAAAGACTGAGAATTTTAAATTTGGGGTCGAATTTGTTTACTGGTGAAATTCCACGATCCATTTCTAACTGCGTGGAGCTAGTAAACTTGGATCTTTCTAACAATAAGTTCAACGGAACAATTCCGGATGTTTTTGGTAATTTATTGAAACTGGAAATTTTGGATCTTTCTTTTAATCAATTCACAGGTTCAATTCCTGCTGAAATTGGAAATGTGTGTGAGAATTTGATGATTCTTGACCTTTCACGGAATTTTTTGTTTGGTGGCATTCCACGGAATTTGGGAAACTGTAGCAAGATTGAATCTTTGGTTTTGTTCTCAAATTTGTTGGATGATGTGATTCCGGTTGAGCTTGGAAAGCTAGCAAAAATGAGAATTTTGGATGTTTCAAGAAATAGTTTGAGTGGAATTATACCTTCTGAGCTTGGAAACTGCTTGGAACTGTCTGAGCTGATTCTTTCAAATCCATACAATCCAGTGCCGCCTTTGAATGATCCTGACTATAATGAAATTGACGATTGCAACTACTTTCAGGGAGGTCTTTCAGAGAACATTACTAGTTTGCCAAAGCTTAGGGTTTTGTGGGCACCAAGAGCTACACTGGAAGGAGAGATTTCTAATAATTGGGGAAGTTGCGAGAGGTTGGAAATGGTTAATCTGGGTGGCAATTTATTTACAGGTGGGATTCCTATTGCTTTTGAAAAATGTGAGAATTTGAAGTTTCTTAATTTGAGTTCTAACAAACTGACCGGTTGGATTAGTGAAGATTTACACGCTCCCTGCGTAAGTGTATTTGACGTCAGTCATAACCAACTTTCTGGGACAATTCCAAATTTTACTTATCAAAATTGCTCATCGGTTGACTTCTCTGTTGCTGACTTGCCTTTTGATTATTACTCGTACTTCCGATATTATACCCTTGTTGGAGCCTATTTGCCTTATTTTGATTCAGGAGGTTATCATGTGATTTATCATAATTTCGGTTGGAATAATTTCACGGGCAATGTACTTTCATTACCAGTTTCAACTGAAATTTTGAGCAAGGATACTATATATGCCTTTCTTGCTGATGGCAATCAGCTTGTTGGTCCGTTATATGAATCCTTGTTTGAAAAATGTAAACCGTTACACGGGCTCGTCATTAGTTTTAGTAACAACTTGATTTCTGGTGTCATACCAGATAAAATCGGTAACTCATGCAATTCATTGCTAGTGTTTAATATTGCTGGTAATAGAGTAACAGGTATGGTTCCAACTAGTTTTGGAGAATCTAGGAACCTTGTTGGGCTTGATTTGAGCAGAAATAAAATTCAAGGGGAGCTTCCCATGAGCATTACTAACTTAACGAGTTTGAATTATCTCTCATTAGGCAGCAATAATCTTACTGGCCACATTCCTCCTGCTTTGGAGCAGTTGCATTCTCTTAAAGTATTGGATCTTTCTTCAAATTCTTTCTCTGGTGAAATACCGAGTGGTTTAGTGAATCTTAAGAATCTCACTTCTTTGTTTTTAGATAACAACAAACTTTCTGGAGAAATACCCTCAGGTTTTGCCAAGATTTCATCTCTTTCCATGTTTAATGTGTCATATAATAATTTGTCAGGGCCGGTTCCGTTGAATTCGAGTATGATGAGATGCGATAGTGTTGTAGGGAACCCACTTCTCGAGCCTTGTACTGGATTTTCTCTTTCAATTCCGCCATCCGATCAAGAAGGATCCACTGGAACTGCACAACCATATATCGATGCACCTCCTTTGACCCCATCTAATAGTGGTAGCGGGTTCAGTTCTATTGAGATTGCATCTATTGCATCAGCATCAGCCATTGTAGCAGTTTTATTAGCACTGATTGTCCTATATGTATATACAAAAAAATGTACCCCTATTGCTTCAATTCGATCTTCTGGTAGAAAAGAAGTAACTGTATTTACAGATATTGGTGTCCCAATAACTTATGAAAGTGTTGTGCGAGCCACTGGTAGTTTCAACGCAAGTAATTGTATTGGAAGTGGTGGTTTTGGAGCGACATACAAAGCTGAAATATATCCAGGAGTTCTCGTAGCTATAAAGAGGCTCTCAGTAGGCAGATTTCAAGGTGTTCAACAATTTCATGCTGAGATTAAAACTCTAGGAAGGTGGCGCCATTCAAATCTAGTGACCCTAATTGGATATCATGTTAGTGAGACAGAAATGTTTCTGATATATAATTATTTGCCAGGAGGAAATTTGGAAAGGTTTATACAAGAAAGGTCTAAGCGAGCAGTGGATTGGAGAATGCTTCACAAGATTGCTTTAGATGTAGCACGTGCACTAGCTTACTTGCATGATCACTGTGTCCCTCGAATACTTCATAGAGATGTCAAGCCAAGCAATATTTTGTTAGACAAAGATTTTAATGCATACCTCTCTGACTTCGGTTTGGCCAGGATTTTAGGGAATTCTGAGACTCATGCCTCTACTGGCGTGGCTGGTACTTTTGGATATGTAGCTCCAGAGTATGCAATGACATGTCGTGTGTCTGATAAGTCTGATGTTTATAGTTATGGTGTAGTGCTTTTGGAGTTGATTTCTGATAAGAAGGCATTGGATCCATCCTTTTCTCCATATGGCAATGGTTTCAATATTGTAGCCTGGGCATGCATGCTTTTACGCCAGGGTAGAGCACGAGAGTTCTTTACTGAAGGATTATGGGATGTGGCCCCTCATGATGATTTGGTGGAGACGTTGCATTTAGCGGTTATGTGTACTGTTGACTCTTTAACTATTCGACCTACAATGAAGCAAGTTGTTCAAAGGTTAAGGCAACTACATCCACCAAATTGCTAG

Protein

>AfisC2G01402
MLRRFARVFLASSLAFLLLVLFSSAQNPSLQLSALVGFRNSVSDPHNLLSSWSSSNICTWFGVTCDLEYRVVAINITGNGKQKFSGKLNPELGNLAELSVLSIRSQSLHGEIPDEIWKLPKLEVLNLEGNTLSGQLPFKFKERLRILNLGSNLFTGEIPRSISNCVELVNLDLSNNKFNGTIPDVFGNLLKLEILDLSFNQFTGSIPAEIGNVCENLMILDLSRNFLFGGIPRNLGNCSKIESLVLFSNLLDDVIPVELGKLAKMRILDVSRNSLSGIIPSELGNCLELSELILSNPYNPVPPLNDPDYNEIDDCNYFQGGLSENITSLPKLRVLWAPRATLEGEISNNWGSCERLEMVNLGGNLFTGGIPIAFEKCENLKFLNLSSNKLTGWISEDLHAPCVSVFDVSHNQLSGTIPNFTYQNCSSVDFSVADLPFDYYSYFRYYTLVGAYLPYFDSGGYHVIYHNFGWNNFTGNVLSLPVSTEILSKDTIYAFLADGNQLVGPLYESLFEKCKPLHGLVISFSNNLISGVIPDKIGNSCNSLLVFNIAGNRVTGMVPTSFGESRNLVGLDLSRNKIQGELPMSITNLTSLNYLSLGSNNLTGHIPPALEQLHSLKVLDLSSNSFSGEIPSGLVNLKNLTSLFLDNNKLSGEIPSGFAKISSLSMFNVSYNNLSGPVPLNSSMMRCDSVVGNPLLEPCTGFSLSIPPSDQEGSTGTAQPYIDAPPLTPSNSGSGFSSIEIASIASASAIVAVLLALIVLYVYTKKCTPIASIRSSGRKEVTVFTDIGVPITYESVVRATGSFNASNCIGSGGFGATYKAEIYPGVLVAIKRLSVGRFQGVQQFHAEIKTLGRWRHSNLVTLIGYHVSETEMFLIYNYLPGGNLERFIQERSKRAVDWRMLHKIALDVARALAYLHDHCVPRILHRDVKPSNILLDKDFNAYLSDFGLARILGNSETHASTGVAGTFGYVAPEYAMTCRVSDKSDVYSYGVVLLELISDKKALDPSFSPYGNGFNIVAWACMLLRQGRAREFFTEGLWDVAPHDDLVETLHLAVMCTVDSLTIRPTMKQVVQRLRQLHPPNC

Gene

>AfisC2G01402
GAAAAAAGTAGCAGCGTGAAGAAGCAGTAGACGGGGAAGACACCACGAAAAAGTGCAAATTTACTCAAAACACCTCTTGATTTATTTATTTTGGTTTCACTTCCTAGTTCGTCTTCTTCCACGGAAAGTAGGGTTAGGGTTAGGCTTTCGCGATGCTCCGCCGATTCGCGAGGGTATTCCTCGCCAGTTCTCTAGCTTTCCTCCTCCTAGTTCTCTTCTCCTCCGCTCAAAACCCTAGTCTTCAGCTATCCGCACTTGTTGGGTTCAGAAATTCAGTTTCGGATCCTCACAATCTTCTGTCCAGTTGGTCTAGCTCGAACATATGTACTTGGTTTGGTGTTACGTGCGATTTAGAATATAGAGTTGTTGCCATTAACATAACAGGTAACGGTAAGCAGAAGTTTAGTGGTAAGCTTAACCCTGAGCTTGGCAACTTGGCGGAGCTCAGTGTACTCTCGATTCGGTCCCAGTCACTTCACGGCGAGATTCCCGACGAGATCTGGAAGTTACCAAAGCTCGAAGTGTTGAATTTGGAGGGCAATACTCTGTCCGGTCAACTACCTTTTAAATTTAAAGAAAGACTGAGAATTTTAAATTTGGGGTCGAATTTGTTTACTGGTGAAATTCCACGATCCATTTCTAACTGCGTGGAGCTAGTAAACTTGGATCTTTCTAACAATAAGTTCAACGGAACAATTCCGGATGTTTTTGGTAATTTATTGAAACTGGAAATTTTGGATCTTTCTTTTAATCAATTCACAGGTTCAATTCCTGCTGAAATTGGAAATGTGTGTGAGAATTTGATGATTCTTGACCTTTCACGGAATTTTTTGTTTGGTGGCATTCCACGGAATTTGGGAAACTGTAGCAAGATTGAATCTTTGGTTTTGTTCTCAAATTTGTTGGATGATGTGATTCCGGTTGAGCTTGGAAAGCTAGCAAAAATGAGAATTTTGGATGTTTCAAGAAATAGTTTGAGTGGAATTATACCTTCTGAGCTTGGAAACTGCTTGGAACTGTCTGAGCTGATTCTTTCAAATCCATACAATCCAGTGCCGCCTTTGAATGATCCTGACTATAATGAAATTGACGATTGCAACTACTTTCAGGGAGGTCTTTCAGAGAACATTACTAGTTTGCCAAAGCTTAGGGTTTTGTGGGCACCAAGAGCTACACTGGAAGGAGAGATTTCTAATAATTGGGGAAGTTGCGAGAGGTTGGAAATGGTTAATCTGGGTGGCAATTTATTTACAGGTGGGATTCCTATTGCTTTTGAAAAATGTGAGAATTTGAAGTTTCTTAATTTGAGTTCTAACAAACTGACCGGTTGGATTAGTGAAGATTTACACGCTCCCTGCGTAAGTGTATTTGACGTCAGTCATAACCAACTTTCTGGGACAATTCCAAATTTTACTTATCAAAATTGCTCATCGGTTGACTTCTCTGTTGCTGACTTGCCTTTTGATTATTACTCGTACTTCCGATATTATACCCTTGTTGGAGCCTATTTGCCTTATTTTGATTCAGGAGGTTATCATGTGATTTATCATAATTTCGGTTGGAATAATTTCACGGGCAATGTACTTTCATTACCAGTTTCAACTGAAATTTTGAGCAAGGATACTATATATGCCTTTCTTGCTGATGGCAATCAGCTTGTTGGTCCGTTATATGAATCCTTGTTTGAAAAATGTAAACCGTTACACGGGCTCGTCATTAGTTTTAGTAACAACTTGATTTCTGGTGTCATACCAGATAAAATCGGTAACTCATGCAATTCATTGCTAGTGTTTAATATTGCTGGTAATAGAGTAACAGGTATGGTTCCAACTAGTTTTGGAGAATCTAGGAACCTTGTTGGGCTTGATTTGAGCAGAAATAAAATTCAAGGGGAGCTTCCCATGAGCATTACTAACTTAACGAGTTTGAATTATCTCTCATTAGGCAGCAATAATCTTACTGGCCACATTCCTCCTGCTTTGGAGCAGTTGCATTCTCTTAAAGTATTGGATCTTTCTTCAAATTCTTTCTCTGGTGAAATACCGAGTGGTTTAGTGAATCTTAAGAATCTCACTTCTTTGTTTTTAGATAACAACAAACTTTCTGGAGAAATACCCTCAGGTTTTGCCAAGATTTCATCTCTTTCCATGTTTAATGTGTCATATAATAATTTGTCAGGGCCGGTTCCGTTGAATTCGAGTATGATGAGATGCGATAGTGTTGTAGGGAACCCACTTCTCGAGCCTTGTACTGGATTTTCTCTTTCAATTCCGCCATCCGATCAAGAAGGATCCACTGGAACTGCACAACCATATATCGATGCACCTCCTTTGACCCCATCTAATAGTGGTAGCGGGTTCAGTTCTATTGAGATTGCATCTATTGCATCAGCATCAGCCATTGTAGCAGTTTTATTAGCACTGATTGTCCTATATGTATATACAAAAAAATGTACCCCTATTGCTTCAATTCGATCTTCTGGTAGAAAAGAAGTAACTGTATTTACAGATATTGGTGTCCCAATAACTTATGAAAGTGTTGTGCGAGCCACTGGTAGTTTCAACGCAAGTAATTGTATTGGAAGTGGTGGTTTTGGAGCGACATACAAAGCTGAAATATATCCAGGAGTTCTCGTAGCTATAAAGAGGCTCTCAGTAGGCAGATTTCAAGGTGTTCAACAATTTCATGCTGAGATTAAAACTCTAGGAAGGTGGCGCCATTCAAATCTAGTGACCCTAATTGGATATCATGTTAGTGAGACAGAAATGTTTCTGATATATAATTATTTGCCAGGAGGAAATTTGGAAAGGTTTATACAAGAAAGGTCTAAGCGAGCAGTGGATTGGAGAATGCTTCACAAGATTGCTTTAGATGTAGCACGTGCACTAGCTTACTTGCATGATCACTGTGTCCCTCGAATACTTCATAGAGATGTCAAGCCAAGCAATATTTTGTTAGACAAAGATTTTAATGCATACCTCTCTGACTTCGGTTTGGCCAGGATTTTAGGGAATTCTGAGACTCATGCCTCTACTGGCGTGGCTGGTACTTTTGGATATGTAGCTCCAGAGTATGCAATGACATGTCGTGTGTCTGATAAGTCTGATGTTTATAGTTATGGTGTAGTGCTTTTGGAGTTGATTTCTGATAAGAAGGCATTGGATCCATCCTTTTCTCCATATGGCAATGGTTTCAATATTGTAGCCTGGGCATGCATGCTTTTACGCCAGGGTAGAGCACGAGAGTTCTTTACTGAAGGATTATGGGATGTGGCCCCTCATGATGATTTGGTGGAGACGTTGCATTTAGCGGTTATGTGTACTGTTGACTCTTTAACTATTCGACCTACAATGAAGCAAGTTGTTCAAAGGTTAAGGCAACTACATCCACCAAATTGCTAGCATGAGCTGTATTTGACAGATAGATTCACTCAGGAATTTAGAACTGAAAATGGCAAGTTATCACAATATGACTGATAGATCCACGCCGCAGTTTAGAACTGAAAATGGCAAGTTGTCACAAACACTTGAAATAGGTCCATTCTTCTTCCACTCTTTGTTTAATGCTGATTTGTAGTTATAGTCTGTGTATTATATTTAACATTTTTTCCATTTATCCCTCGGGTAGCCTACTGATGTACTTGCAAAGAGATTTCAGCTGTAAATTAATCAGTTTAGTTAGAGATTCTAAATTTGCAGGATTTAAATTTGTCCCTTTTCATTCATGTATTTCAATTTGCTATTATAATTAATGTGAAAT

Functional annotation

Database	accession number	e-value	annotation
nr	ONK76275.1	7.1e-253	uncharacterized protein A4U43_C03F25910, partial
Swissprot	Q9S7I6.1	2.4e-181	Receptor-like protein kinase 2
trEMBL	A0A5P1FCZ6	5.1e-253	Protein kinase domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G02130.1	54.69	0.0	1129	CLI1;RPK2;TOAD2	receptor-like protein kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G01402	AT3G02130.1	1152	437	16	4	1082	12	1151	54.69	0.0	1129
AfisC2G01402	AT1G69270.1	494	177	3	586	1079	91	537	54.66	3e-143	506
AfisC2G01402	AT1G69270.1	124	56	2	33	134	34	157	37.10	1e-13	76.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	31	66	42.4	5.7e-11
PF13855.3	LRR_8	Repeat	143	202	27.6	1.6e-06
PF00560.30	LRR_1	Repeat	216	238	13.8	0.056
PF00560.30	LRR_1	Repeat	266	286	9.8	1.2
PF00560.30	LRR_1	Repeat	379	399	9.3	1.7
PF00560.30	LRR_1	Repeat	615	637	10.7	0.58
PF00069.22	Pkinase	Domain	806	1003	143.6	6.3e-42

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005777	C	peroxisome
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009554	P	megasporogenesis
GO:0009556	P	microsporogenesis
GO:0009651	P	response to salt stress
GO:0009664	P	plant-type cell wall organization
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009808	P	lignin metabolic process
GO:0009826	P	unidimensional cell growth
GO:0009846	P	pollen germination
GO:0009942	P	longitudinal axis specification
GO:0009945	P	radial axis specification
GO:0010073	P	meristem maintenance
GO:0010152	P	pollen maturation
GO:0010234	P	anther wall tapetum cell fate specification
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019901	F	protein kinase binding
GO:0051260	P	protein homooligomerization
GO:0046777	P	protein autophosphorylation
GO:0048354	P	mucilage biosynthetic process involved in seed coat development
GO:0048508	P	embryonic meristem development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network