result

Gene information

Detail information of AfisC2G04605

Location

Gene	Chr	Start	End	Strand
AfisC2G04605	chr2	755556666	755560659	-

Sequences

CDS

>AfisC2G04605
ATGTTTAACGATACCATCCTGCAACGAGACTTATCCAAGAAACTATGGGGGCTGAAAGTGTGGGTCGTAGTTGGATTAGGCATCGGATTTCTCATGATCTTTGTTCTTATTGTGTTAGTTATATGTCTTTCTATTAGGAGTAAAAAGAAGCTAAATAGATCCTCTAGTAACCTTCCTAACCAAATCCCAGAAGTTTCGAAGGAAATAAAGGAAATTAGCGTGGAACAATCCTCACATCATAACCTAAAAGACAAAAACAGTGAAAATGGTTTGGATAAAATCAAGCTACATTTGAATTTGGGTAAGTCAAGGTCAAGGCATGGCGACACTGATAGTCATTCGGGTTCATTTCATATAGATGTTAGTTCGGATGAAGGGGGTTCAAGTACTTATGGCGGTGTATTCAGACGAACTTCTTCTTCGTATTCAATTTCTGCTCCTTCGCCTTTGGTAGGTTTACCTGAATTTTCTCATCTTGGTTGGGGACATTGGTTTACTTTGAGAGATTTGGAACTTGCTACCAGTCGATTTTCAAAGGAGAATGTTCTTGGAGAGGGTGGCTACGGTGTTGTTTACAAGGGTACTTTGATTAATGGAACTCAAGTTGCTGTTAAGAAGCTTCTAAACAATCTAGGTCAGGCGGAAAAGGAGTTTCGAGTGGAAGTTGAAGCGATTGGTCATGTAAGACACAAGAACTTAGTTCGACTTTTGGGTTATTGTGTTGAAGGTACTCAAAGAATGCTGGTCTATGAATATGTCAATAATGGAAACCTTGAACAATGGCTTCATGGTGCCATGCGTCAAAGGGGTTCTTTAACTTGGGAAAGCCGTCTAAAGATTCTTCTTGGAACTGCCAAAGCCCTGGCCTACTTGCACGAAGCAATCGAACCAAAAGTGGTGCATCGTGATATAAAGTCCAGCAACATTCTGGTTGATGATGAATTCAATCCAAAAATATCAGATTTTGGTTTAGCTAAGCTTCTTGGTGCTGGAAAGAGTCATGTGGCTACTCGAGTAATGGGCACATTTGGATATGTGGCACCAGAATATGCAAACACAGGGCTTCTTAATGAAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGTTGGAGGTTGTTACCGGAAGAGACCCTGTGGATTATGGTCGCCCAGCAAATGAGGTAAATTTGATAGATTGGCTAAAAATGATGGTCGGAAGCAGGCGTTCAGAAGAGGTGGTGGACCCAAGTATGGAGATGAAACCAACTTCAAGAGCTCTGAAAAGGACTCTATTAACCGCTTTGAGATGTGTTGATCCTGATTCAGAAAAAAGACCTAAGATGGGTCAAGTTGTTAGGATGTTGGAATCCGATGACCCAATTCCTCGTGAGGACAGAAGGAATAGAAGAAACCGCGCTGAGAATTCAGAAATTGAATCACAAAGAGCAAACTCGGATACAGATAAAAGCGATAAATGA

Protein

Gene

>AfisC2G04605
ATCACTGAACAGTGGGAAAGAACACAGACGAAAAATTAGAAACCACATTATATCACGTCACTTTATTTTCTTTCTTTATCCATGTCCCATTTCTCAATTTCTACAAAAGCAAAATTAAATAAAAAGCTCTTCTTTTACTTTGAATTAGCAAAAAACCGCTCTTTCCACAAACCCATTACAGATCTGAACTCGCTTTTCAGCTTATACTGTTTGCCAAATATAAACAGCATTCAGTGTTTTGCTTTTGTTTATAATTTTGGGTGCTAATTTGGGCTCAGGTAGTGAAATCTTTTAGGGTTTTGAAGTAAACATTGTATTTTGTTGGAGTTCTATTCCAATTTGAAGGTACGTAAATGATAAAGCTTTCTTATTTGTTTACTTGCAATTCTGGTTGGTTTGGGCTTATTATGTAACAAAAAATAGAATTTGCGGTGAAATGCGAGTACTTTTAGTGTTTTGGATGCACTAGAATATGTTAGCTAAGTTTAGTTTTAGTTCTATTTCATTAATCACAGCTGTTTTGGTTGTTGACTGCGGTTGGAGAGGTTGCTTTTTTTTTTTTTTGGGTATGGGTTGTGACATTATAGCTATTAACTGCTTCTTCTAATCAGTCTGTGAACCTAACACTGTTTGCTTTAATTTGTCACAGTAGTTTAATAAATAGTGTTAAACAATATTTAATAATAAATGAAGTGATCATACTAGCAATGCTACATCAACATCAACATATCATCAAGCGTTTGTCCTTATAGCTTCAGTATCTACTTAATTTCCTGCATAAACCAAGGTTTCACATGGTCCATTTAAAACAGACAGAAATACATATTTTACTAACTGCACTTTTTTTTCCTTGTGTAGGCATTCGTTTGTCATATTGAATATGTTTAACGATACCATCCTGCAACGAGACTTATCCAAGAAACTATGGGGGCTGAAAGTGTGGGTCGTAGTTGGATTAGGCATCGGATTTCTCATGATCTTTGTTCTTATTGTGTTAGTTATATGTCTTTCTATTAGGAGTAAAAAGAAGCTAAATAGATCCTCTAGTAACCTTCCTAACCAAATCCCAGAAGTTTCGAAGGAAATAAAGGAAATTAGCGTGGAACAATCCTCACATCATAACCTAAAAGACAAAAACAGTGAAAATGGTTTGGATAAAATCAAGCTACATTTGAATTTGGGTAAGTCAAGGTCAAGGCATGGCGACACTGATAGTCATTCGGGTTCATTTCATATAGATGTTAGTTCGGATGAAGGGGGTTCAAGTACTTATGGCGGTGTATTCAGACGAACTTCTTCTTCGTATTCAATTTCTGCTCCTTCGCCTTTGGTAGGTTTACCTGAATTTTCTCATCTTGGTTGGGGACATTGGTTTACTTTGAGAGATTTGGAACTTGCTACCAGTCGATTTTCAAAGGAGAATGTTCTTGGAGAGGGTGGCTACGGTGTTGTTTACAAGGGTACTTTGATTAATGGAACTCAAGTTGCTGTTAAGAAGCTTCTAAACAATCTGTAAGTTGAAGTAATATGAGTACTGTGTATTGTTTGCTTATCATCAGCCCTAATTTTCATTTTGGATAGTCTTACTCATGAAAACTGTGTTTTTAGAAACTTCAACATCTAGTGCTAAGTATAATTTTCATTGTTAAGTGTTCTGACTGTCTTTCCTAAGTGGCGTTTTCATAGGTCTGTCATCAGATACTTTCGGATGCGAATTGTGTCACATTTGCATACGCATCCGAAATTATTTTCAGATATCGGATATCGTATCCATAGATACAGATATTTATCTGCTTTGCTCATACTTAATAAAGTCGAAAAAATAAATGATTTTTTTGAGTCCAATGTAATCCTTTTTAGGAATAATGCTAACATAAATACAAAAAATATATAATGATATCACTTTTGGACAGCAAATATTCATTTATACATGCATAATATGAATTATTACCATCATAAAACAGTAGATATCAATCCTTTTATGTAGTAAATATGCATAATCTTAATTACTATATATTAATAAAAACTGGTCGGATAATTTTTGATGCGGATGCTACCATATCTGTATCCTTTTTTGGCTTGTGGATATTTTTTCAATTTTCGGATACAGATGCGGACGGATTTTTTGGGTACTCATCGATCGCTCTACATTCTAATGAGTATTTAACATGGACTGCTCTACATTCTAATGAGTATTTAACATGGACTTGCAGAGGTCAGGCGGAAAAGGAGTTTCGAGTGGAAGTTGAAGCGATTGGTCATGTAAGACACAAGAACTTAGTTCGACTTTTGGGTTATTGTGTTGAAGGTACTCAAAGGTACATATCTTACCCTATTTCTTTTCCTTTTTCTTTTAGTTAAATGTTACGATATCACCATTTTCAAAATTGATATAAAATTGTCAATAATGCTGCACGTATTACTTGTAGAATGCTGGTCTATGAATATGTCAATAATGGAAACCTTGAACAATGGCTTCATGGTGCCATGCGTCAAAGGGGTTCTTTAACTTGGGAAAGCCGTCTAAAGATTCTTCTTGGAACTGCCAAAGCGTAAGTATAATCTTTACGCATAACATCAATTTGCCAAAATGTGATAGGAATATATATACTAAAACGGTTAACTGTCTGGTTCTAAAATGTTTGTTGCAGCCTGGCCTACTTGCACGAAGCAATCGAACCAAAAGTGGTGCATCGTGATATAAAGTCCAGCAACATTCTGGTTGATGATGAATTCAATCCAAAAATATCAGATTTTGGTTTAGCTAAGCTTCTTGGTGCTGGAAAGAGTCATGTGGCTACTCGAGTAATGGGCACATTTGGGTAGGCCAGCATGCATTGCCCTTATGTTTTACATAGCTTAAGAAATAAATCTGTTATAAATTGTTAGCATTTTCGGCAGATATGTGGCACCAGAATATGCAAACACAGGGCTTCTTAATGAAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGTTGGAGGTTGTTACCGGAAGAGACCCTGTGGATTATGGTCGCCCAGCAAATGAGGTAGGAAAGATGAGTCATTGTTAAACGCCTATCTACAAGCATTAGTTTCACCATCCATCTAAAAGTGAATCTATACGAGGAATTTCTATTGACAATATCAGTTTCCATAAGTGCAATACTTTTCCTTGGTTTTGAAACTTTTAATAGTAAGCACAATCATGGTTTTTTTTGCATCAACCGAGGTAGAAAATTCCAAAAATAGAGGAAAATGTGTCAAAATTTTGGTTTGGAGTTGTATAGTCCAAACGTGATACGGGTCAATAACGATCGCATTAGAATCAACTTAGTTTCAGTTTGCTGGGTTTGGAAATAAATCTAATTTCTCAATGATGGTGATAACATGGTGAGTGAGGGTGCAGGTAAATTTGATAGATTGGCTAAAAATGATGGTCGGAAGCAGGCGTTCAGAAGAGGTGGTGGACCCAAGTATGGAGATGAAACCAACTTCAAGAGCTCTGAAAAGGACTCTATTAACCGCTTTGAGATGTGTTGATCCTGATTCAGAAAAAAGACCTAAGATGGGTCAAGTTGTTAGGATGTTGGAATCCGATGACCCAATTCCTCGTGAGGTACAAACTTTACTCCATTTTCGGGTTTGACAATTGGGTATCTAACAATATTTGCAAAGAAACAATGACACACCGATTAGCAAAGTAACATGTTGTTGTTTCATACTTAATGTTGCATTTCTGTATTATGCTAAAGTGCATTTATTTCAGGCTTTCCTTAAATTTCTTAAAGTTAATATGTGACATGCCTTTTATCTGGAGTGAAATTTTAAAAGCTTTCCATAACCATTAACCCTAAAACTTTGCGTATAAATGTCATTGAATGCCTTATCGATAATGTATAGTAAAATACTCTGATAATATACAGGACAGAAGGAATAGAAGAAACCGCGCTGAGAATTCAGAAATTGAATCACAAAGAGCAAACTCGGATACAGATAAAAGCGATAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273001.1	7.2e-197	probable receptor-like protein kinase At5g18500
Swissprot	Q8LEB6.1	1.9e-154	Probable receptor-like protein kinase At5g18500
trEMBL	A0A199UZW4	2.2e-195	Putative receptor-like protein kinase (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G56720.1	67.68	5e-178	620		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G04605	AT1G56720.3	492	129	9	7	483	5	481	67.68	5e-178	620
AfisC2G04605	AT1G56720.2	492	129	9	7	483	5	481	67.68	5e-178	620
AfisC2G04605	AT1G56720.1	492	129	9	7	483	5	481	67.68	5e-178	620

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	178	446	167.0	4.6e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0010068	P	protoderm histogenesis
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network