result

Gene information

Detail information of AfisC2G07526

Location

Gene	Chr	Start	End	Strand
AfisC2G07526	chr2	1215455073	1215457135	+

Sequences

CDS

Protein

Gene

>AfisC2G07526
TACCTTGAAAGTGAAGGTAAATGGAAAACTTTTCATATGCATTAATTTGTTCAGATAATGACTGCATTGTTTACTTCATTGAAATTAAGAGGAGAGAACAGTTGGTATTTTGCCAACTATATTTGCTAATGAGAAATACTTGCATGAAATGGAAATGGTGGTGTCATCATTTGAAGCAGTCGCAGGAGTAGGAGCAGCTTCTTCATACACAACACTAACGATTCAAGCGATGTCTAAACATTTCTCGAACTTAAGACATGCCATTATCACTCAAATTAACAATTGTTCTTCAACTTCAAAGCTTCAACACCTAAAACATAAAAGTGATGATACACTATTTCAGCCTCAAGCTGGCTTCCTGAGCAGTAGTAGTAGAACACCACAAATATGGAGAGCGGTAAGAGGATTGCCAGAAGATTCTGTCTCTAAACTTCGAGCATGGCTTTTCCACCACTTTCTTCACCCGTATGTCCCTTTCTTCTTTCTTATCATCTACTTAAATCATTTTTCTGCTTAAATTTTTATGTCATTAATTCATACATGGCTTATACTAATCCAGAGCATGTTTGATAACTTCTTAGAAGTAACATAAACAACTTATGAGTAGTTTCAGAGCTTATAAGGAGGCATAATTAGCTTTGAAGTTTTTTTTGAAAGAAAAGTACGCTATTTGTTGCTCAAAAGGTGTGATATTTGAACTTTTGTATTTCCAAATTTCAATTTCAAATTTTCAAACTATACACTGAAATTTTCTTTTTTAAATTACAAGTCAAAAGTTTATCAACTTAACCTTTTGTCTTTCTGAAAGAAGGACGACTTTTGAAATAAGGGAACTCTTTTTACCTTTTGTTTGCGTAGGGGGGCATAAGTTACATAAGCGTACTAACTAATGTTGTAACTAACAGCTACCCAAGCGACGAAGAGAAACTTACACTTGCTTCACAAACTGGCTTAACCCGAAACCAGGTAATTTTTATTTTATTTTCTAGTTTTTTATTACATATATTCGAATCGATCAACCTTGATCCTCTAATATTATTATTATTCATGATTATAAATATTGTTTCAATTATCATCTATAGATATCAAATTGGTTCATAAATGCTCGTGTTCGACTGTGGAAGCCTATGATTGAAGATATGTACAAAGAAGAGTTTGGTGAAGGTATTTGAACATTATGGATTAATATTCTTTATGGATGATAACTTTTAGCATGCACTCGTACATTGAAGAATCTGGAATTAGAAAAATGCACTCATATTATTGGTTTGGTTAGGCTAGATATGTTATCTTTCAGAAACTTTCAGGCAAATAGTTTGTTAACCTAATATAGACTGCTTAGTGTTATTTTTTTTCTTTTTCAATAGACTTTAATATTTGGTGGGTTTGATATGGTTTTGAGTACATATTGTTCTATTTCATTTCATACTTCTATGTCATGGACCATGTGCTCTTTAATTTTTTGGCTATAAATTGGTTTTTCGGTAGACTGCATTTTTTGGTGAATTTTTTTCAGTTATATCTGTCAAATCAGAAAGGACAAAATGCTAAGTAATAGTTTATACATAACAAACTCTTTGATCACAAGAAGATTTCAATGATATGACATTTTCATATATAACTCAAAACATAGACGATTTGACAAACTTACCTATATACATGTCATGATTCTTTTTTTAACGGTACACAGCTAATGAATTGGCTAGTCTAGCAAGCGGTCACTCAAATGATACTAATTTTGATTCTCCGTACTCCATAAAAGCCAGAAATAGGATATATGCTTTGAAATTCTTTGAGATATCTCATCAAATTTAATAGTTGCAATCTGTGTAGGCATATCCATTTATGTAGTATGATTTTGGTTTCTATTACAGGGGTTCGATGTGCCTCTATGGAAGAAAATTCTTGGCAGAACGTTGACAGGCATGTAATTGTCTCAGTTTTGATAAGCTCCTGGTTACTATCATACAGGTTCAATGTATTAACATTCAGTTGGTATTTTCTTATTACTTTGTAGGTGGCAAGCCAGACGATATAACAGTGATAGTTGGTCAAAGAGGCCG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK67388.1	3.4e-46	uncharacterized protein A4U43_C06F19650
Swissprot	Q1PFD1.1	2.1e-40	BEL1-like homeodomain protein 11
trEMBL	A0A5P1EN06	2.4e-46	Homeobox domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G75430.1	49.71	4e-44	174	BLH11	BEL1-like homeodomain 11

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G07526	AT1G75430.1	171	67	3	1	155	110	277	49.71	4e-44	174
AfisC2G07526	AT4G34610.2	174	66	3	1	161	229	395	50.57	6e-44	173
AfisC2G07526	AT4G34610.1	174	66	3	1	161	229	395	50.57	6e-44	173

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07526.8	POX	Domain	1	39	50.8	2.3e-13
PF05920.8	Homeobox_KN	Family	98	137	67.1	7.9e-19

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000978	F	RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077	F	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0001525	P	angiogenesis
GO:0002089	P	lens morphogenesis in camera-type eye
GO:0003682	F	chromatin binding
GO:0003705	F	transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
GO:0003714	F	transcription corepressor activity
GO:0005829	C	cytosol
GO:0005215	F	transporter activity
GO:0005634	C	nucleus
GO:0005667	C	transcription factor complex
GO:0006810	P	transport
GO:0007626	P	locomotory behavior
GO:0008134	F	transcription factor binding
GO:0008285	P	negative regulation of cell proliferation
GO:0009610	P	response to symbiotic fungus
GO:0009640	P	photomorphogenesis
GO:0009737	P	response to abscisic acid
GO:0009966	P	regulation of signal transduction
GO:0010051	P	xylem and phloem pattern formation
GO:0010076	P	maintenance of floral meristem identity
GO:0010077	P	maintenance of inflorescence meristem identity
GO:0010089	P	xylem development
GO:0010154	P	fruit development
GO:0010197	P	polar nucleus fusion
GO:0010201	P	response to continuous far red light stimulus by the high-irradiance response system
GO:0010223	P	secondary shoot formation
GO:0010227	P	floral organ abscission
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0010229	P	inflorescence development
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0014036	P	neural crest cell fate specification
GO:0035855	P	megakaryocyte development
GO:0042803	F	protein homodimerization activity
GO:0045638	P	negative regulation of myeloid cell differentiation
GO:0045665	P	negative regulation of neuron differentiation
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter
GO:0046982	F	protein heterodimerization activity
GO:0048457	P	floral whorl morphogenesis
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0060216	P	definitive hemopoiesis
GO:0080006	P	internode patterning
GO:0090470	P	shoot organ boundary specification

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network