result

Gene information

Detail information of AfisC2G08242

Location

Gene	Chr	Start	End	Strand
AfisC2G08242	chr2	1350427254	1350430616	+

Sequences

CDS

>AfisC2G08242
ATGTCAACTTCTCCCACAGTGAGCGATGAGCTCTCAAAAGGAACTTCAATATTCGGCCTTCACATGGGAGTGGTAATAGGAATTTGCGTAGGTGTTGCCTTTGTCCTTCTTCTCTTCATCATTTCAATATACATAGCTTCAAGGAAACCCAAATCCAAAAATACCAATCAAAGCACAATCATACCTAGCCATTCTAAGGAAATTCAAGAAATTCCAAGTGAACCCAAATTACTGCTGCAAGAAAGCAGCAGTCTTTCTAATCATTCAAATGAAAATAGAATCGATATAGAGATCGGGAAGGATCATAGGATAACGTACCCGAAACATGAGAATAATCATTCCAGTGGGGAGAGCAGAGCAGCGGAGCAATCGGCTGTGGTGAACGTTCCAGAAGTTTCTCATTTGGGCTGGGGACATTGGTACACTCTGAGAGAGCTGGAAGCAGCTACTGATATGTTTAGTGATGATAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATCATGGTGTTTTGGCTGATAATACTCAGATTGCTGTCAAGAATTTGCTTAATAATAGGGGACAGGCAGAGCGGGAATTCAAAGTTGAAGTAGAAGCAATCGGAAGAGTTCGACATAAGAACTTAGTTAGATTACTTGGATATTGTGCTGAAGGTGCACATAGGATGCTCGTATACGAGTACGTAGATAATGGGAATTTGGAACAATGGCTTCATGGTGATGTTGGACCAGTCAGTCCTCTTACTTGGGAAATTCGAATGAACATTATTTTAGGGACAGCAAAAGGATTGATGTACTTACATGAAGGCCTTGAGCCCAAAGTAGTTCATCGCGATGTGAAGTCTAGCAATATACTACTTGACAAGCAATGGAATTCTAAGGTCTCGGATTTTGGGCTGGCCAAGCTTTTGGGCTCGGAAAGAAGCTATGTTACTACACGTGTCATGGGCACATTTGGCTATGTTGCGCCAGAATATGCGAGCACTGGCATGTTGAATGAAAGGAGCGATGTATATAGCTTTGGAATACTTATAATGGAAGTAATAACGGGTCGAAACCCTGTGGACTACAGCAGACCACCTGGAGAGGTCAATCTGGTAGACTGGCTGAAGAATATGGTGAGTAATCGAAACTCAGAAGGGGTTCTGGATCCGAAAATTCCAGAAAAACCGACTTCCAGAGCACTGAAAAGAGCTCTTCTGGTGTCGTTGAGATGTGTTGACCCGGATTCACAGAAAAGACCCAAAATGGGACATGTTATTCATATGCTCGAAGTCGATGATTTTCCCTATAGAGATGAACGAAGGGTTGGTAGAGAGCAGGGTAGAACATATCGAGAAACTCCAGTAGATAAAGCAAGATCAATTGAAAAGCCGATGAGTGAAGCAAGCGATGTAAGTGGTGATGAAAACAACAGGAACAACAACATCAACAAGCCTTCTAGGTTTAAAAAGGAAGATGATGAATAA

Protein

Gene

>AfisC2G08242
GAATAAAGAAATGATCGCTATCATCCTTAACATTAGTACACTCAATTATTCCCTGTACAATAATCGCCAATAGGTCCATATCAAAACAGCTGCATCATCTTTCCTACTTTAGTTCAGAAACTACCCTTCACCTCCAAACTCATTAATGTCCTTCTGAACTCTCTACCACTTTTATCTTCAATCACATTCACAATTCACAATGAAATCAACAGCCCCAAATTTCAATCTCTAATCCACCTTCCAAAATTCACCCTCTTTCCCACAAAAAACCCATTAAAAATTCCAAAAAAATAGTGTAAAAAAAAAATGTCAACTTCTCCCACAGTGAGCGATGAGCTCTCAAAAGGAACTTCAATATTCGGCCTTCACATGGGAGTGGTAATAGGAATTTGCGTAGGTGTTGCCTTTGTCCTTCTTCTCTTCATCATTTCAATATACATAGCTTCAAGGAAACCCAAATCCAAAAATACCAATCAAAGCACAATCATACCTAGCCATTCTAAGGAAATTCAAGAAATTCCAAGTGAACCCAAATTACTGCTGCAAGAAAGCAGCAGTCTTTCTAATCATTCAAATGAAAATAGAATCGATATAGAGATCGGGAAGGATCATAGGATAACGTACCCGAAACATGAGAATAATCATTCCAGTGGGGAGAGCAGAGCAGCGGAGCAATCGGCTGTGGTGAACGTTCCAGAAGTTTCTCATTTGGGCTGGGGACATTGGTACACTCTGAGAGAGCTGGAAGCAGCTACTGATATGTTTAGTGATGATAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATCATGGTGTTTTGGCTGATAATACTCAGATTGCTGTCAAGAATTTGCTTAATAATAGGTAATTTAATTAGTTGTCAACTGTGGTTACGGTATCAAAAAGAAACGAGTCTATGATGTTAATATTACTTAATAAGGGCATGTCTAAGAGTAGGTATGTTTAATATGTGATTTTGTTTCAGGATTATTGTGTGCTTCATAATGGATAGTAGGACCTTGGCATCAAAATCTTATCTTTGTTTGTGTAGCCTATGGAAAACCACATATTTTTAGGTGGAATTCTTCATATGGGCCTAAAGTTCCTACTTTAGAATCTATAGCTGATTAAGAACTGTATGCTCATTCATTTCATTTACTTATAATCCACGATAAGAAAACTAGTCAGTAGCATATAAAAAAACCGAAGAAAACAATGATAATCAGGAGCATAATTTTATTGAGATTCACTTAAACATACTATCTGCACCTGATAAATATCTGTTTTTTTTCTCTCTCAATGAATTTGTAGGGGACAGGCAGAGCGGGAATTCAAAGTTGAAGTAGAAGCAATCGGAAGAGTTCGACATAAGAACTTAGTTAGATTACTTGGATATTGTGCTGAAGGTGCACATAGGTATTGACCTGCAATTTTTCAATATGTATGTATGTGTGTACATATGCACGCATGCACGCGTACGTCTGTATGTACGTATGTGTGTATGTACGTGTGTGTGTGTACGTGTGTGTGTACGTATGTGTACGCACGCATACGTATGTGTGTATGTAAATGAAGCAGATTATTCTACAGTATGGTATAACCATCATGAAGCACGTAGTGTTGATCCATACTATACTATATTTGACCATAAGACCATTGCATTTCATACATTTTGATCGTGTATATCTATCTGCTAGACTAATACTATTCCAAAATGTAACCGTGTAGGATGCTCGTATACGAGTACGTAGATAATGGGAATTTGGAACAATGGCTTCATGGTGATGTTGGACCAGTCAGTCCTCTTACTTGGGAAATTCGAATGAACATTATTTTAGGGACAGCAAAAGGGTATGGTAACGACGTCTTCATATATTGCTTAGGTATATTATGGTTTCTGAACATTTTAATATAATCTTCTGTCAGATTGATGTACTTACATGAAGGCCTTGAGCCCAAAGTAGTTCATCGCGATGTGAAGTCTAGCAATATACTACTTGACAAGCAATGGAATTCTAAGGTCTCGGATTTTGGGCTGGCCAAGCTTTTGGGCTCGGAAAGAAGCTATGTTACTACACGTGTCATGGGCACATTTGGGTTCGTAATACTTCTCATAACCATTATGTCATACTTTTACCTGAATATATAAACAATTTGAAAATACTCTATTTGGACATGAAGGTTGTTGGAATTCAAATGGTCTAATGATTTGTATTTTGTTAGCTATGTTGCGCCAGAATATGCGAGCACTGGCATGTTGAATGAAAGGAGCGATGTATATAGCTTTGGAATACTTATAATGGAAGTAATAACGGGTCGAAACCCTGTGGACTACAGCAGACCACCTGGAGAGGTTTGAAATCAATTCAGTTTAAAATGCTAATAAAATTCATAAAATTTCAGATTGTATCTAAAAAAAATGCAATCATGAAATTTCAGGTCAATCTGGTAGACTGGCTGAAGAATATGGTGAGTAATCGAAACTCAGAAGGGGTTCTGGATCCGAAAATTCCAGAAAAACCGACTTCCAGAGCACTGAAAAGAGCTCTTCTGGTGTCGTTGAGATGTGTTGACCCGGATTCACAGAAAAGACCCAAAATGGGACATGTTATTCATATGCTCGAAGTCGATGATTTTCCCTATAGAGATGTAAGTTAAAGTTTGAGGTCATATTTTTGAAATAAGTTCACAGCTATCATTAAGACCCTTATATATAACTCTGAAAAAATAGCACATTTGGTTAAAACATTGCAAATGTGCAAGAATTTTAATTCATTCCTCAATTACATAATGTATATTGTAGATTCAAGAAGTTTACGGACATATTTTCTATGCATTCAACAAGATTTCTTGTAAAAATATGTTTGTATTATCTCTTCGTGATGTATGTAGAATGCCATCGTAGTCATAAAATCCTTAATGATTTGTATGAATTTATTTTAGGAACGAAGGGTTGGTAGAGAGCAGGGTAGAACATATCGAGAAACTCCAGTAGATAAAGCAAGATCAATTGAAAAGCCGATGAGTGAAGCAAGCGATGTAAGTGGTGATGAAAACAACAGGAACAACAACATCAACAAGCCTTCTAGGTTTAAAAAGGAAGATGATGAATAAACTAGCTTCCACAGCATTTTCTAATGCTCAAATGTGGTGTATATTATAATATAAGTTTCCATTTTGTGTATATGGGTTAGACTGGATATTTGCTCAAATTTTGTAGAAAATTTGTTGGTTTTTGTGATACTGTTTATCATTTGAATATCTTTATAGTATCTTCACTATAGTGTCATATAAAATGCCCAATTGTATCTTTATCAATATATGTAATACAATCATAATTATATATATTCAGTTTCACAGT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245947.1	1.8e-211	probable serine/threonine-protein kinase At1g01540
Swissprot	Q3EDL4.2	1.6e-169	Probable serine/threonine-protein kinase At1g01540
trEMBL	A0A5P1E6Z4	1.3e-211	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G01540.2	67.46	1e-176	616		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G08242	AT1G01540.2	464	121	8	7	455	9	457	67.46	1e-176	616
AfisC2G08242	AT4G02630.1	463	134	6	1	446	1	462	67.17	2e-174	608
AfisC2G08242	AT4G01330.1	471	136	7	6	464	10	463	64.97	2e-172	602

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	154	422	158.0	2.7e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0010068	P	protoderm histogenesis
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network