result

Gene information

Detail information of AfisC2G08581

Location

Gene	Chr	Start	End	Strand
AfisC2G08581	chr2	1413888486	1413890946	+

Sequences

CDS

>AfisC2G08581
ATGTTGAATCTGGATTTAAGCAGTAGAAAGTTATGGGCACAAGTGGCAACAGTATTTCTGCTCGTCACATTCTTTGCTGTTGACATATATCACTATGTTGACAACAGTTCCACTCCGAGACTGACGTGGACGAGAAAGGCAGCGTTAGAGGCCGAGAGGGTGGCCGCTATCTACTGTTCTGATCATGGCAGAGCTTATACCGATGGAAACACCGACGTCAACGGTGTTCAAGTTTGTGAGTGCCATAACTGCTACAGCGGGAACAGTTGCGAGATTTTCAATCAGAGTTGTGTTGCCGATGCTACAGTTGGGGATGCACTGTTTCTAAGGAAGTACTGGATGCATCACAGAGAAAACATTGCAACATTAGTTTCTGGATGGCACAGAATGAGCTACTTTATTGGCAAAAACTTCATGTCTGAAGAACTAGAGAAACATATTAGGCTTCTGCACGAGAAAGTCGGCAATGCTAATGTGACAGGAAGACATATCGTGTTTGGCCACGGAATAACTCAACTTCTAAACGGAGTAATTATCTCACTGTCACCAAATCTTACTGCTACCCCAAATGCTCCCATAAAGAAAGTTGTTGCAGCTGCTCCTTATTATCCCGTGTTCAAGAGCCAAACCAATTATTTTAACCATTCGGGATACCAGTGGATGGGAAATGCATTAGACTATGTAAATACAACTACTCCACAAGATTTCATTGTGCTTGTGACTTCACCAAATAATCCGGATGGTTATCTTCACAACAAGTCAGTAATCCCAGGTTCTTTAGCTGTGTACGATCATGCAACATATTGGCCTCATTACGCGCCAATAGAATACACATCAGACGAAGATATCATGTTGTTTACTCTTTCCAAGTACACAGGACACGCTGGCAGTCGATTTGGGTGGGCTATTATAAAGGACAAGGATGTGTATGACAAATTAACAACTTATATAGCAACGAATACTGAGGGTGTTTCACGTGAAACACAATTCAGAACTCTAAAAATTATAAAAGACATTTTGGTACCCAAGGAACCACACGCTGACTTCAATGAATTTGGCTATTATACTTTACGGACTAGATGGGTTAATATCACCCAACTTGTGAATTCAACTGATCGATTCTCCGTTCAAGAAATGGATCCTAGACATTGCAATTACTTTAATAGAACCAGAGAACCTGCTACAGCTTATGCATGGCTGAGATGTAACTGGGAAGACGAAGAAGACTGTGCAGCCGTACTAGAAGCTGGAAAAATCATCGCCCAAGGTGGTGTTAGGTTTGAAGCAAATAGTCGCTATGCTCGTCTGAGTTTGGTCAAGACATCTGATGATTTTGATCAATTGGTGGATCGACTGAGTGTTCTTGTTCACACTGATAGGGCAAGTAGGAATACTTCGCTATACAATTACATAAGTAATCAACAAAGATCGAGCGAGCGTCCTTTCATCTTTGATGCTGATCACTGA

Protein

Gene

>AfisC2G08581
CCTTCACACCGATATCAGTTCACTATTTATAGAGGTCCGTTCTTGGAAATGCATATAAACATCTCTAAGAAATAACCAAGAAGAGAACTGCAAACTGCAGATCCAGAAGATCAGAGCATAATGTTGAATCTGGATTTAAGCAGTAGAAAGTTATGGGCACAAGTGGCAACAGTATTTCTGCTCGTCACATTCTTTGCTGTTGACATATATCACTATGTTGACAACAGTTCCACTCCGAGACTGACGTGGACGAGAAAGGCAGCGTTAGAGGCCGAGAGGGTGGCCGCTATCTACTGTTCTGATCATGGCAGAGCTTATACCGATGGAAACACCGACGTCAACGGTGTTCAAGTTTGTGAGTGCCATAACTGCTACAGCGGGAACAGTTGCGAGATTTTCAATCAGAGTTGTGTTGCCGATGCTACAGTGTAAGCATTATATTGAAAAGAATATCAATCAAAATAAACCTATACTGTAATTAAGAAGACATGGTAAACCAATTATTTGCTTAGAAGAAAAGTTTGTTGGCTGTTTCTCAACTCATAAAGGATGGCATCAAACCTAAACATCGAATAAGTAGGTGTTCATTAGTATTAAATAAAATGAAACATTGTACGCTGACTTAAGAAACTCGCGTACATTTATCATTTGATCCATCAATTACCCAACTTACTAACGTCCTTTATCATAATTTTAATCTGTACACACGGATACAGTGGGGATGCACTGTTTCTAAGGAAGTACTGGATGCATCACAGAGAAAACATTGCAACATTAGTTTCTGGATGGCACAGAATGAGCTACTTTATTGGCAAAAACTTCATGTCTGAAGAACTAGAGAAACATATTAGGCTTCTGCACGAGAAAGTCGGCAATGCTAATGTGACAGGAAGACATATCGTGTTTGGCCACGGAATAACTCAACTTCTAAACGGAGTAATTATCTCACTGTCACCAAATCTTACTGCTACCCCAAATGCTCCCATAAAGAAAGTTGTTGCAGCTGCTCCTTATTATCCCGTAAGTCACCAATGAGTTATTCATTCTACATCTATTAAACATAATTTCAAAAGTAATCTTAATTTTTGTGCAAATATAAACACAGGTGTTCAAGAGCCAAACCAATTATTTTAACCATTCGGGATACCAGTGGATGGGAAATGCATTAGACTATGTAAATACAACTACTCCACAAGATTTCATTGTGCTTGTGACTTCACCAAATAATCCGGATGGTTATCTTCACAACAAGTCAGTAATCCCAGGTTCTTTAGCTGTGTACGATCATGCAACATATTGGCCTCATTACGCGCCAATAGAATACACATCAGACGAAGATATCATGTTGTTTACTCTTTCCAAGTACACAGGACACGCTGGCAGTCGATTTGGGTATGTTTGTTTATACTTTATGCAGACGCTATTCCATCTTAGATATGTTAATTTCTTATATCCATATTATGAATATCTGAAAATTTTATTTTTTAGGTGGGCTATTATAAAGGACAAGGATGTGTATGACAAATTAACAACTTATATAGCAACGAATACTGAGGGTGTTTCACGTGAAACACAATTCAGAACTCTAAAAATTATAAAAGACATTTTGGTACCCAAGGAACCACACGCTGACTTCAATGAATTTGGCTATTATACTTTACGGACTAGATGGGTTAATATCACCCAACTTGTGAATTCAACTGATCGATTCTCCGTTCAAGAAATGGATCCTAGACATTGCAATTACTTTAATAGAACCAGAGAACCTGCTACAGGTATATGTTATGCATTTTACTTTATTAGGTTAATTAATCAAGTAGATGTACGTAGCAAAACTATAAGTTTGGGGCTAACTAGTATCTAATATTTAACCGATTAATGGTAGCTTATGCATGGCTGAGATGTAACTGGGAAGACGAAGAAGACTGTGCAGCCGTACTAGAAGCTGGAAAAATCATCGCCCAAGGTGGTGTTAGGTTTGAAGCAAATAGTCGCTATGCTCGTCTGAGTTTGGTCAAGACATCTGATGATTTTGATCAATTGGTGGATCGACTGAGTGTTCTTGTTCACACTGATAGGGCAAGTAGGAATACTTCGCTATACAATTACATAAGTAATCAACAAAGATCGAGCGAGCGTCCTTTCATCTTTGATGCTGATCACTGAAGCTACTCGTCATCATAATTAATATATATTGGTTTTAATTTCGTTGTTTATCAATTGTTCTCTTGTGTAAGCGTGGCTTGATTGTAAGTCATATATTGTGTTCTGAATTTAGTGTGTGAGTTTTTCTTTGAAAGTAGTCGGGTGCACATCTGTGCCAATCAATGCACGTTCTTTTATCTTTAATAGGTTAATTGTCACAATTTCAATCACCCATGTCTACTATTTTCATATTTCGTGTTGCCATGAAGCACAATGAATCTCAGCTATTCAATGCAGTAAATTGGTAATTTGCGAG

Functional annotation

Database	accession number	e-value	annotation
nr	AAF36437.1	5.2e-187	cysteine-sulphoxide lyase
Swissprot	P31756.1	2.6e-143	Cysteine sulphoxide lyase
trEMBL	Q9M7L9	3.8e-187	Cysteine-sulphoxide lyase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	40.74	8e-101	364		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G08581	AT1G34060.1	459	256	9	6	457	1	450	40.74	8e-101	364
AfisC2G08581	AT1G34040.1	452	246	8	15	459	8	450	42.04	2e-100	362
AfisC2G08581	AT1G23320.1	359	209	8	104	455	31	380	37.33	5e-68	255

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	42	97	69.8	1.7e-19
PF04864.10	Alliinase_C	Domain	99	455	513.4	2.6e-154

Gene Ontology

Accession	Ontology	Name
GO:0043231	C	intracellular membrane-bounded organelle
GO:0009888	P	tissue development
GO:0009605	P	response to external stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009851	P	auxin biosynthetic process
GO:0009908	P	flower development
GO:0016846	F	carbon-sulfur lyase activity
GO:0044425	C	membrane part
GO:0044444	C	cytoplasmic part
GO:0048364	P	root development
GO:0048825	P	cotyledon development
GO:0070529	F	L-tryptophan aminotransferase activity
GO:0070546	F	L-phenylalanine aminotransferase activity
GO:0070547	F	L-tyrosine aminotransferase activity
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K16903	TAA1; L-tryptophan---pyruvate aminotransferase	EC:2.6.1.99	Tryptophan metabolism	ko00380

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network