result

Gene information

Detail information of AfisC2G08587

Location

Gene	Chr	Start	End	Strand
AfisC2G08587	chr2	1414290109	1414291792	-

Sequences

CDS

>AfisC2G08587
ATGTTGAATCTGGATTTAAGCAGTAGAAAGTTATGGGCACAAGTTGCAACAGTATTTCTGCTCGTCACATTCTTTGCTGTTGACATATATCACTATGTTGACAACAGTTCCACTCCGAGACTGACGTGGACGAGAAAGGCAGCGTTAGAGGCCGAGAGGGTGGCCGCTATCTACTGTTCTGATCATGGCAGAGCTTATACCGATGGAAACACCGACGTCAACGGTGTTCAAGTTTGTGAGTGCCATAACTGCTACAGCGGGAACAGTTGCGAGATTTTCAATCAGAGTTGTGTTGCCGATGCTACAGTTGGGGATGCACTGTTTCTAAGGAAGTACTGGATGCATCACAGAGAAAACATTGCAACATTAGTTTCTGGATGGCACAGAATGAGCTACTTTATTGGCAAAAACTTCATGTCTGAAGAACTAGAGAAACATATTAGGCTTCTGCACGAGAAAGTCGGCAATGCTAATGTGACAGGAAGACATATCGTGTTTGGCCACGGAATAACTCAACTTCTAAACGGAGTAATTATCTCACTGTCACCAAATCTTACTGCTACCCCAAATGCTCCCATAAAGAAAGTTGTTGCAGCTGCTCCTTATTATCCCGTGTTCAAGAGCCAAACCAATTATTTTAACCATTCGGGATACCAGTGGATGGGAAATGCATTAGACTATGTAAATACAACTACTCCACAAGATTTCATTGTGCTTGTGACTTCACCAAATAATCCGGATGGTTATCTTCACAACAAGTCAGTAATCCCAGGTTCTTTAGCTGTGTACGATCATGCAACATATTGGCCTCATTACGCGCCAATAGAATACACATCAGACGAAGATATCATGTTGTTTACTCTTTCCAAGTACACAGGACACGCTGGCAGTCGATTTGGGTGGGCTATTATAAAGGACAAGGATGTGTATGACAAATTAACAACTTATATAGCAACGAATACTGAGGGTGTTTCACGTGAAACACAATTCAGAACTCTAAAAATTATAAAAGACATTTTGGTACCCAAGGAACCACACGCTGACTTCAATGAATTTGGCTATTATACTTTATGGACTAGATGGGTTAATATCACCCAACTTGTGAATTCAACTGATCGATTCTCCGTTCAAGAAATGGGTCACATTGCAATTACTTTAATAGAACCAGAGAACCTGCTACAGGTATATGTTATGCATTTTACTTTATTAGGTTAA

Protein

Gene

>AfisC2G08587
ATGTTGAATCTGGATTTAAGCAGTAGAAAGTTATGGGCACAAGTTGCAACAGTATTTCTGCTCGTCACATTCTTTGCTGTTGACATATATCACTATGTTGACAACAGTTCCACTCCGAGACTGACGTGGACGAGAAAGGCAGCGTTAGAGGCCGAGAGGGTGGCCGCTATCTACTGTTCTGATCATGGCAGAGCTTATACCGATGGAAACACCGACGTCAACGGTGTTCAAGTTTGTGAGTGCCATAACTGCTACAGCGGGAACAGTTGCGAGATTTTCAATCAGAGTTGTGTTGCCGATGCTACAGTGTAAGCATTATATTGAAAAGAATATCAATCAAAATAAACCTATACTGTAATTAAGAAGACATGGTAAACCAATTATTTGCTTAGAAGAAAAGTTTGTTGGCTGTTTCTCAACTCATAAAGGATGGCATCAAACCTAAACATCGAATAAGTAGGTGTTCATTAGTATTAAATAAAATGAAACATCGTACGCTGACTTAAGAAACTCGCGTACATTTATCATTTGATCCATCAATTACCCAACTTACTAACGTCCTTTATCATAATTTTAATCTGTACACACGGATACAGTGGGGATGCACTGTTTCTAAGGAAGTACTGGATGCATCACAGAGAAAACATTGCAACATTAGTTTCTGGATGGCACAGAATGAGCTACTTTATTGGCAAAAACTTCATGTCTGAAGAACTAGAGAAACATATTAGGCTTCTGCACGAGAAAGTCGGCAATGCTAATGTGACAGGAAGACATATCGTGTTTGGCCACGGAATAACTCAACTTCTAAACGGAGTAATTATCTCACTGTCACCAAATCTTACTGCTACCCCAAATGCTCCCATAAAGAAAGTTGTTGCAGCTGCTCCTTATTATCCCGTAAGTCACCAATGAGTTATTCATTCTACATCTATTAAACATAATTTCAAAAGTAATCTTAATTTTTGTGCAAATATAAACACAGGTGTTCAAGAGCCAAACCAATTATTTTAACCATTCGGGATACCAGTGGATGGGAAATGCATTAGACTATGTAAATACAACTACTCCACAAGATTTCATTGTGCTTGTGACTTCACCAAATAATCCGGATGGTTATCTTCACAACAAGTCAGTAATCCCAGGTTCTTTAGCTGTGTACGATCATGCAACATATTGGCCTCATTACGCGCCAATAGAATACACATCAGACGAAGATATCATGTTGTTTACTCTTTCCAAGTACACAGGACACGCTGGCAGTCGATTTGGGTATGTTTGTTTATACTTTATGCAGACGCTATTCCATCTTAGATATGTTAATTTCTTATATCCATATTATGAATATCTGAAAATTTTATTTTTTAGGTGGGCTATTATAAAGGACAAGGATGTGTATGACAAATTAACAACTTATATAGCAACGAATACTGAGGGTGTTTCACGTGAAACACAATTCAGAACTCTAAAAATTATAAAAGACATTTTGGTACCCAAGGAACCACACGCTGACTTCAATGAATTTGGCTATTATACTTTATGGACTAGATGGGTTAATATCACCCAACTTGTGAATTCAACTGATCGATTCTCCGTTCAAGAAATGGGTCACATTGCAATTACTTTAATAGAACCAGAGAACCTGCTACAGGTATATGTTATGCATTTTACTTTATTAGGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	AAF36437.1	2.3e-148	cysteine-sulphoxide lyase
Swissprot	P31756.1	1.1e-113	Cysteine sulphoxide lyase
trEMBL	Q9M7L9	1.7e-148	Cysteine-sulphoxide lyase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34060.1	41.16	3e-78	289		Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G08587	AT1G34060.1	379	207	9	6	377	1	370	41.16	3e-78	289
AfisC2G08587	AT1G34040.1	372	197	8	15	379	8	370	42.74	3e-77	285
AfisC2G08587	AT1G23320.1	306	176	8	81	376	5	303	36.93	1e-51	200

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04863.10	EGF_alliinase	Domain	42	97	70.2	1.3e-19
PF04864.10	Alliinase_C	Domain	99	379	399.6	9.7e-120

Gene Ontology

Accession	Ontology	Name
GO:0043231	C	intracellular membrane-bounded organelle
GO:0009888	P	tissue development
GO:0009605	P	response to external stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009851	P	auxin biosynthetic process
GO:0009908	P	flower development
GO:0016846	F	carbon-sulfur lyase activity
GO:0044425	C	membrane part
GO:0044444	C	cytoplasmic part
GO:0048364	P	root development
GO:0048825	P	cotyledon development
GO:0070529	F	L-tryptophan aminotransferase activity
GO:0070546	F	L-phenylalanine aminotransferase activity
GO:0070547	F	L-tyrosine aminotransferase activity
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K16903	TAA1; L-tryptophan---pyruvate aminotransferase	EC:2.6.1.99	Tryptophan metabolism	ko00380

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network