result

Gene information

Detail information of AfisC3G00374


Location
GeneChrStartEndStrand
AfisC3G00374chr36182291661823616+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQEG03141.18.2e-20zinc finger protein 1-like isoform X2
SwissprotQ9SSW2.17.4e-18Zinc-finger protein 2
trEMBLA0A5B9MP795.9e-20Zinc finger protein 1-like isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G19580.148.158e-1988.6AZF2;ZF2zinc-finger protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain153946.42.2e-12
PF13912.3zf-C2H2_6Domain7910337.51.4e-09

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0001047Fcore promoter binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0008270Fzinc ion binding
GO:0009409Presponse to cold
GO:0009414Presponse to water deprivation
GO:0009416Presponse to light stimulus
GO:0009737Presponse to abscisic acid
GO:0009793Pembryo development ending in seed dormancy
GO:0010200Presponse to chitin
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0042538Phyperosmotic salinity response
GO:0043565Fsequence-specific DNA binding
GO:0048235Ppollen sperm cell differentiation
GO:0055062Pphosphate ion homeostasis
GO:2000280Pregulation of root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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