result

Gene information

Detail information of AfisC3G00614

Location

Gene	Chr	Start	End	Strand
AfisC3G00614	chr3	108726558	108728363	-

Sequences

CDS

Protein

Gene

>AfisC3G00614
CTTTGTCATCAAGTGAAGGATGAACCGCGTGACCCATCCTCCACTTCCAATGCAAGTTCAACATCAAAACATCCACGTTTTTTCAAACTATTGAACCAATCTAATAATTAAACTATAAAATAAGCATTCCCAAAATTCACGTGTCCTTATTCCCTCCTATTCAATGCTTCTATATAACCAAACTCCAAATCAAATTGGTAACGAAATCCTCATTTACTCACTTTCTTCTTCGCCTTTGACAGTAACAAATCATGTCTGCAGCAACGAAGCAAGATAAACCTTCCACCTTCGCCATGACCTGCAATCTTCTGAGCCAATTCATCAAAGAAAAGGGCTCGCTAGGCGATCTGGGACTCGAAATGGCAATCGGTAATTTTATATATTGTTTTTTCTGCTCATTTCAGATCTGAAATCTTTTCGTGTCTAGATCCATTTATTTATTCGTGTGTTATCATATTTTTAGGCAAAAGCGATACCTATCGGCCACCAACTACGATGAACCTGCTACAAAACGTAGCTGCATCGGGAACTGGTACGAGAGAAACCGTACCGGAGCGAAACAATACCAAACCCATTGATTTGTTTCCTCAAGCAGCAGAAAATAGGTTCGTGTACAATTTATTTTCAGATCAGTCCCTCTTAACTGCAAAAAAGTCAGAAAAGTAAAGTTTATGTTTGTGTTTATACTTTTGAATTTGTAAATGCAGAAAGCCTGAAAGCTCGCAATTGACAATATTTTATGGAGGGAAAGTGATGGTGTTTGATAATTTTCCTGCAAATAAGGCAAATGATTTGATGATGCTAGCAGGAAAAGGATCTGACCTGAAATCAGAGAAAGTTAAAGCTGCAAATTCGAATTCGAATTTGAATTTGGTTACAGTACCTGCTAACTCTCCAATTGTGCAACCAAGATCCGTCCAAACTGTTGCTTCAGGTAAATTTATCGCTCTTCTTCTAGTTTATGGTTCATGCAAGTTTAAAAACCACCTTTTATCTTTGATTTCATGACCCAAGCATCTAGATTATCAGATTAGTATATGTTGTTGATTCAAATCCTTGTCCTCCCAAAAGCTTAAAAGATTATAGTGTAAACGAGCAATTTAATTATTCATCATGTGCTATAAACATATTCATTGTTCATATTCTTCTAGGATGATATGCAAAACCAAATAAGTTGGGTTAAGGATGGAAAATTGCAAGAAAATTTAATTATGTTTGTATATATTCAAAATGTATTCGGCTTTGCTATGTTTATGTGCATGTATTTGGTATTCTATATCTAAATTTGGGCAAAGATTAATCTGTATCTTTTTCTTACAACAGACCTACCAATTGCAAGAAAAGCTTCACTGCATCGATTTCTTGAGAAGAGAAAGGATAGGTAATCAATCTACTCTAATTTGAATAAAATCCAACAATATTCATAGCAATTTTATCCAATTTGAATGTTTATAAATTTCTTTTTAACTCACAGGATTAATGCTAAAGCGCCATATCAAATTAACCAAAAGAAAGAGTTAGGGAACAAGGAAGAGAACCAGCCATGGCTTGCACTAACTCCTACCCTTAATTAATTCGAATTGCTGAAGATGATGATATTTCTATTTTTAGTTGCTAGCATATAGCACATTGATTTAAACATTGATAGCTCGGATTCAATCATACTTCTTTTTTTCCTTGAAACCTCGGATTCAAGGATATGATTATTATGTATTTTTCTCCGTTTTGGATGGTATGTAATCGTCAAGTCATTTATGTTTATAAATTTTGTTGCTAACATATGTTAGCATTATTCATTAATAACAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020694311.1	9.7e-45	protein TIFY 10a
Swissprot	Q84R94.1	3.1e-32	OsJAZ5
trEMBL	A0A8T3AHT8	1.6e-44	Protein TIFY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74950.1	41.32	3e-33	138	JAZ2;TIFY10B	TIFY domain/Divergent CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00614	AT1G74950.1	242	91	11	9	208	15	247	41.32	3e-33	138
AfisC3G00614	AT1G19180.1	237	105	8	9	209	20	249	37.55	2e-28	122
AfisC3G00614	AT1G72450.1	217	94	10	11	193	10	213	35.02	4e-23	104

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06200.11	tify	Domain	89	121	62.5	1.5e-17
PF09425.7	CCT_2	Motif	165	190	55.5	3.3e-15

Gene Ontology

Accession	Ontology	Name
GO:0005634	C	nucleus
GO:0007275	P	multicellular organism development
GO:0009611	P	response to wounding
GO:0009733	P	response to auxin
GO:0009751	P	response to salicylic acid
GO:0010112	P	regulation of systemic acquired resistance
GO:0042803	F	protein homodimerization activity
GO:0097659	P	nucleic acid-templated transcription
GO:2000022	P	regulation of jasmonic acid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13464	JAZ; jasmonate ZIM domain-containing protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network