result

Gene information

Detail information of AfisC3G00887

Location

Gene	Chr	Start	End	Strand
AfisC3G00887	chr3	158579755	158580081	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	ONK72334.1	1.0e-26	uncharacterized protein A4U43_C04F18260
Swissprot	Q0DWC7.1	7.4e-22	OsPK2
trEMBL	A0A5P1F2E3	7.4e-27	Ethylene receptor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04580.1	45.83	2e-22	100	EIN4	Signal transduction histidine kinase, hybrid-type, ethylene sensor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00887	AT3G04580.2	96	52	0	1	96	379	474	45.83	2e-22	100
AfisC3G00887	AT3G04580.1	96	52	0	1	96	379	474	45.83	2e-22	100
AfisC3G00887	AT3G23150.1	108	59	1	1	108	379	483	42.59	2e-19	90.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00512.22	HisKA	Domain	1	54	32.4	6.3e-08

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000156	F	phosphorelay response regulator activity
GO:0016021	C	integral component of membrane
GO:0001944	P	vasculature development
GO:0002237	P	response to molecule of bacterial origin
GO:0042742	P	defense response to bacterium
GO:0005739	C	mitochondrion
GO:0004674	F	protein serine/threonine kinase activity
GO:0046872	F	metal ion binding
GO:0005524	F	ATP binding
GO:0005789	C	endoplasmic reticulum membrane
GO:0006355	P	regulation of transcription, DNA-templated
GO:0042802	F	identical protein binding
GO:0009408	P	response to heat
GO:0009625	P	response to insect
GO:0009651	P	response to salt stress
GO:0009690	P	cytokinin metabolic process
GO:0009727	P	detection of ethylene stimulus
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009871	P	jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway
GO:0010105	P	negative regulation of ethylene-activated signaling pathway
GO:0010119	P	regulation of stomatal movement
GO:0010182	P	sugar mediated signaling pathway
GO:0018106	P	peptidyl-histidine phosphorylation
GO:0023014	P	signal transduction by protein phosphorylation
GO:0038199	F	ethylene receptor activity
GO:0050665	P	hydrogen peroxide biosynthetic process
GO:0051301	P	cell division
GO:0051740	F	ethylene binding
GO:0052544	P	defense response by callose deposition in cell wall
GO:0071281	P	cellular response to iron ion
GO:1900140	P	regulation of seedling development
GO:2000904	P	regulation of starch metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network