Detail information of AfisC3G01125


Location
GeneChrStartEndStrand
AfisC3G01125chr3205112071205115362-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrBAD95987.13.4e-44MADS-box transcription factor AP3
SwissprotQ003J2.11.5e-28VviAP3b
trEMBLQ53US52.5e-44MADS-box transcription factor AP3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54340.143.234e-25 110AP3;ATAP3K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain12938.17.2e-10
PF01486.14K-boxFamily5913039.64e-10

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0007584Presponse to nutrient
GO:0008134Ftranscription factor binding
GO:0010093Pspecification of floral organ identity
GO:0044763Psingle-organism cellular process
GO:0048527Plateral root development
GO:0071249Pcellular response to nitrate

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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