result

Gene information

Detail information of AfisC3G01202

Location

Gene	Chr	Start	End	Strand
AfisC3G01202	chr3	215912548	215913851	-

Sequences

CDS

>AfisC3G01202
ATGTTTAACATTGTTAGTTTTATAGTGGAAATAGGATTTGTGATTATCAAATATTTGTATTGTTTAGATTACTCCGAGATGCTGCCAGGGTCGATAGACGGTAGCGTATTGTATTTGCAAAAACGTCATCGAACGAGCAACGACGCTTGGATGCAGAATCACTCGTCTAAATTGAAGAGAACAACTTCTTCTCATCCCGTCGTGCTAGAGCTGATTGATCGAGCCGGCTTCTCACTTATCTTTCGGCTGGGATACACTCAATTGGATCATCATTTGATCACAACTTTGGTGGACGGATGGAGGCCGGAGACGTCTTCATTTCACCTACGGGTAGGGGAGATGACCATTACGTTGGGTGATGTTGTTGTCTTGCTTGGCTTACCCATAGATGGTGCTCCATTGAGCAATCCAGAGTCGGTAGATTACATGGAGTTGTGCGAGCGGCTCTTAAGAATATCTCCTCCTGTTGAACAGTGGTGGGGTAACGAGATGATAGTTACTATATGGTTCAGGGAGGAGCTCACCAACGACATTCCAGCAGACACCTCAGACATTCAGATTGAGCAGCGTGCTCGAGCCATTATACTGCATATCATCACTTCACGCTTGATTTGCGATCATTCGAAAACTCGTATGTGGCTCAGATGGCTTACATTTCTAGAGGACTTCGATGTGTGCCGCCAGTATTCTTGGGGTAGTGCAGTCCTAGCGTATACATTCACGGAGCTGACGAGGCTTGCTTTGCTAGAGAACACATCCATAGGTGGTTGTTTGAGTCTAGTACAGTTATGGTGTTGGACATACCTTCCAGTCGGGAGAATATCAATGAAGAGTTCAAATGTTGATTTATTTATGTCATATGGTGTTAGGTGGGTAGGACCGAAGAGCACGTCGAAATCTTCAAGGCGCAGTGTTACGTTCTACTGCAACGAGTTGGATGTACTTGATTATGATGCGGTGACATGGCTTGGAGATCTTCCAAACTTATGCACCGTGTCTATTCAGTTGTGGATAGCACGGGTTCCACTCATTTGCTTCGGTGGTGTAGCCCATCATCTTCTTGACGGAGTGATGTGA

Protein

Gene

>AfisC3G01202
ATGTTTAACATTGTTAGTTTTATAGTGGAAATAGGATTTGTGATTATCAAATATTTGTATTGTTTAGATTACTCCGAGATGCTGCCAGGGTCGATAGACGGTAGCGTATTGTATTTGCAAAAACGTCATCGAACGAGCAACGACGCTTGGATGCAGGTAATACACGTTCATATGGAGTAGAAATATATATTGGTTATACATAGCAGTTATATTTTGTTGTTTTTCTGACAGAATCACTCGTCTAAATTGAAGAGAACAACTTCTTCTCATCCCGTCGTGCTAGAGCTGATTGATCGAGCCGGCTTCTCACTTATCTTTCGGCTGGGATACACTCAATTGGATCATCATTTGATCACAACTTTGGTGGACGGATGGAGGCCGGAGACGTCTTCATTTCACCTACGGGTAGGGGAGATGACCATTACGTTGGGTGATGTTGTTGTCTTGCTTGGCTTACCCATAGATGGTGCTCCATTGAGCAATCCAGAGTCGGTAGATTACATGGAGTTGTGCGAGCGGCTCTTAAGAATATCTCCTCCTGTTGAACAGTGGTGGGGTAACGAGATGATAGTTACTATATGGTTCAGGGAGGAGCTCACCAACGACATTCCAGCAGACACCTCAGACATTCAGATTGAGCAGCGTGCTCGAGCCATTATACTGCATATCATCACTTCACGCTTGATTTGCGATCATTCGAAAACTCGTATGTGGCTCAGATGGCTTACATTTCTAGAGGACTTCGATGTGTGCCGCCAGTATTCTTGGGGTAGTGCAGTCCTAGCGTATACATTCACGGAGCTGACGAGGCTTGCTTTGCTAGAGAACACATCCATAGGTGGTTGTTTGAGTCTAGTACAGGTATTAGCATTATATCCCTCAATATGAATTTATTCGTATGTTCTTATACAGTGCAATTATATATGTATACACGTTTGCAGTTATGGTGTTGGACATACCTTCCAGTCGGGAGAATATCAATGAAGAGTTCAAATGTTGATTTATTTATGTCATATGGTGTTAGGTATGTTAATCACGTTAGTTGACTTTATACACATATTTCGATCCGATAATTCAAGCTTTTCTCTTCTCGTAGGTGGGTAGGACCGAAGAGCACGTCGAAATCTTCAAGGCGCAGTGTTACGTTCTACTGCAACGAGTTGGATGTACTTGATTATGATGCGGTGACATGGCTTGGAGATCTTCCAAACTTATGCACCGTGTCTATTCAGTTGTGGATAGCACGGGTTCCACTCATTTGCTTCGGTGGTGTAGCCCATCATCTTCTTGACGGAGTGATGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020270590.1	2.8e-60	serine/threonine-protein phosphatase 7 long form homolog
Swissprot	Q9LNG5.1	1.9e-45	Protein MAIN-LIKE 3
trEMBL	A0A2N9IPV6	7.3e-55	PMD domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G04865.1	32.36	2e-45	180		Aminotransferase-like, plant mobile domain family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01202	AT2G04865.1	343	211	7	29	355	7	344	32.36	2e-45	180
AfisC3G01202	AT1G48120.1	360	211	6	26	358	10	364	32.50	3e-44	176
AfisC3G01202	AT2G25010.1	343	209	7	30	355	6	339	31.49	5e-38	155

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF10536.6	PMD	Domain	85	322	141.7	2.9e-41

Gene Ontology

Accession	Ontology	Name
GO:0010073	P	meristem maintenance

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network