result

Gene information

Detail information of AfisC3G01268

Location

Gene	Chr	Start	End	Strand
AfisC3G01268	chr3	223768999	223771723	-

Sequences

CDS

>AfisC3G01268
ATGGCATTCCAGTCACATATCTTACTGTTTTTGCTGCTTATTCTGATGCTTTCACTCGACATATCATGTCAAAATAGCAACACAAATATAAGATTGGGTACAATTTTATCTCCATCCACTAACAGTTCATCTCTGCTCTCCCCCTCCGGAGATTTTGCTTTTGGCTTCCGTGCACTTGACACTAATCCCGCACTCTTTTTTCTTGCTGTCTACTACTACAAAATCAAGCCCAAAACTGTAATTTGGACCGCAAATGGAGACAACCCTGTGTCTAACAAATCCAAAGCTCAGCTGACACCAGAAGGACAGTTGACCTTGCAAGACTCGTCAAATCAACAAATTTGGAGTTCGAATATCAATGGAGCGAGCTATGGCTCCATTCGCGATGATGGAAATTTTATACTGTTTAGTGGATCTTCTATAATTTGGCAGACATTTGATTCCCCAACTGATACTATATTGCCTGGTCAGATATTGAAACAAAACACCAGTATCTTCTCAAAACTTACAGACGATGATTATACAAAAGGAAGATTTAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATAAGCTGGACTTTCCAACACAAACTGATGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTACGTTTTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCCGAACCTGTTCTAACTGGGGACAACTACTTGAGAGCAATTTTGGACCCAGATGGTGGTTTCAGTGGATTAATCAATTGTCAGTGCCCTCCTCACTTCTCTTTCATAGACCCAACCAGAAAGTATAAAGGCTGCAAACCAGATTATATTCCACAACTCTGCGAACAAGGCAGTGGATCAACTTTCGCGTTTGAAGTCATTAAAAATTTGGATTGGCCAACGATTGATTCCCAAAAGCTTACTCCATTGAATGAAACTCAATGCCAAGATGAATGCTTGAATGATTGCTTTTGTTTGGTTGCTATATACAACAACGTTGGAACTTGCTATAAGAAAATGTTCCCGCTTTCTAATGGAATATCAAAACAAAGTGTGAATACAGTGGCTTACATCAAGTATAACAGATTGAACACAAGTAACTGGAAGAGTAACAAAAATAGTGATGGGTCAGGTAACTGGAAGAGTTGGGCAATCGTAGTATCATCAATTCTAGTTGGTTCTGTAGTACTAATTGGTGCTTGTTGCTGCATGTATTTTATAAGAAAACCTGAAAATGTTACACCAAAGACAAGCAGTATTGTTTCAATTTCAGCAACGTGCTCTTTCACATACAAAGAGCTGGAAGAAGCTACCAAAGGATTCAGCGAAGAGATTGGTAAAGGCGCTTTTGGTGTAGTCTACAAAGGAGTCATGCCATCACAATCTAATGATAATAATACACTTATAGTAGCAGTCAAGAAATTAGATGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAAAATGAAATCGCTACCATTGGCCAAACGCATCATAAAAATTTGGTGCAGCTCATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCCCTTAATAAGTACATCTTCGGAAGCAATAGACCCGAGTGGAATCAAAGAGTACAAATTGCTTTAGGTATCGCAAATGGACTGGCGTATTTGCACGAACAGTGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAAAACGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTGGATTTGTTAGTTGAGGACGACGAAGAAGCAAAGAGTGATGGAAATAGATTAAAAAGGTTTGTCATGGTTGGTATTTCTTGTGCGGAAGACGAGCCTTGGTTAAGACCTACAATGAAGAAGGTTGTGCAAATGCTGGAAGGAACAACCGAGTCCTCTATCCATTAG

Protein

Gene

>AfisC3G01268
ATGGCATTCCAGTCACATATCTTACTGTTTTTGCTGCTTATTCTGATGCTTTCACTCGACATATCATGTCAAAATAGCAACACAAATATAAGATTGGGTACAATTTTATCTCCATCCACTAACAGTTCATCTCTGCTCTCCCCCTCCGGAGATTTTGCTTTTGGCTTCCGTGCACTTGACACTAATCCCGCACTCTTTTTTCTTGCTGTCTACTACTACAAAATCAAGCCCAAAACTGTAATTTGGACCGCAAATGGAGACAACCCTGTGTCTAACAAATCCAAAGCTCAGCTGACACCAGAAGGACAGTTGACCTTGCAAGACTCGTCAAATCAACAAATTTGGAGTTCGAATATCAATGGAGCGAGCTATGGCTCCATTCGCGATGATGGAAATTTTATACTGTTTAGTGGATCTTCTATAATTTGGCAGACATTTGATTCCCCAACTGATACTATATTGCCTGGTCAGATATTGAAACAAAACACCAGTATCTTCTCAAAACTTACAGACGATGATTATACAAAAGGAAGATTTAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATAAGCTGGACTTTCCAACACAAACTGATGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTACGTTTTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCCGAACCTGTTCTAACTGGGGACAACTACTTGAGAGCAATTTTGGACCCAGATGGTGGTTTCAGGTTTGTTTTATATATAAATTAGAACTTATAATACTCTGATTCAGCTTAGTAATTCCAGTTTTAGAACAATTAATTAAATATTTCAGGCAGTATTCCTTTCCAAAGGCGCAGCTAAGCACTGGAAGCTGGAGCATTGCAGCAAATCTTGTTCAAGATCTATGCTCACATATACTTAATTTGGAAGTGGGATATGTGGTTTCAATAGTTACTGCACAAAATATGACAGTGGATTAATCAATTGTCAGTGCCCTCCTCACTTCTCTTTCATAGACCCAACCAGAAAGTATAAAGGCTGCAAACCAGATTATATTCCACAACTCTGCGAACAAGGCAGTGGATCAACTTTCGCGTTTGAAGTCATTAAAAATTTGGATTGGCCAACGATTGATTCCCAAAAGCTTACTCCATTGAATGAAACTCAATGCCAAGATGAATGCTTGAATGATTGCTTTTGTTTGGTTGCTATATACAACAACGTTGGAACTTGCTATAAGAAAATGTTCCCGCTTTCTAATGGAATATCAAAACAAAGTGTGAATACAGTGGCTTACATCAAGTATAACAGATTGAACACAAGTAACTGGAAGAGTAACAAAAATAGTGATGGGTCAGGTAACTGGAAGAGTTGGGCAATCGTAGTATCATCAATTCTAGTTGGTTCTGTAGTACTAATTGGTGCTTGTTGCTGCATGTATTTTATAAGAAAACCTGAAAATGTTACACCAAAGACAAGCAGTATTGTTTCAATTTCAGCAACGTGCTCTTTCACATACAAAGAGCTGGAAGAAGCTACCAAAGGATTCAGCGAAGAGATTGGTAAAGGCGCTTTTGGTGTAGTCTACAAAGGAGTCATGCCATCACAATCTAATGATAATAATACACTTATAGTAGCAGTCAAGAAATTAGATGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAAAATGAAATCGCTACCATTGGCCAAACGCATCATAAAAATTTGGTGCAGCTCATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCCCTTAATAAGTACATCTTCGGAAGCAATAGACCCGAGTGGAATCAAAGAGTACAAATTGCTTTAGGTATCGCAAATGGACTGGCGTATTTGCACGAACAGTGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAAAACGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTGGATTTGTTAGTTGAGGACGACGAAGAAGCAAAGAGTGATGGAAATAGATTAAAAAGGTTTGTCATGGTTGGTATTTCTTGTGCGGAAGACGAGCCTTGGTTAAGACCTACAATGAAGAAGGTTGTGCAAATGCTGGAAGGAACAACCGAGTCCTCTATCCATTAGAAGATCTATCTCCGTTTTATGCTACCACCTCCTTACAATAAGACATGATATATCCGATCTCTGAAGTGTTTTATGTACGGTACCTGGATGGTTTATGTTGGGGAGTATGAAGAGGTCTGATTCTTAGGATGGACCTGTTGGTCCTCCATTCAAATGTCTTATAAATTTCATTTGATTTTTAGTTCAATTACTTATGGTATTGCTTTATCCATGCTTTGCACACTGATTCATCATTATTTGCCCAATGGTTTGTTTTTTCACCTTCTTATTTGGTCACAAGGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241834.1	1.1e-225	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 isoform X1
Swissprot	Q7FAZ3.1	5.7e-166	OsRLCK134
trEMBL	A0A5P1FSN2	1.3e-223	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	38.26	1e-141	501	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01268	AT5G60900.1	771	373	19	8	733	8	720	38.26	1e-141	501
AfisC3G01268	AT1G34300.1	771	417	28	28	733	25	761	33.07	3e-93	340
AfisC3G01268	AT5G35370.1	783	420	27	43	731	59	806	29.89	2e-82	303

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	78	162	74.0	7.6e-21
PF07714.14	Pkinase_Tyr	Domain	455	728	165.7	1e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0016310	P	phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network