result

Gene information

Detail information of AfisC3G01277

Location

Gene	Chr	Start	End	Strand
AfisC3G01277	chr3	224726882	224729350	-

Sequences

CDS

>AfisC3G01277
ATGGCTTTCCATTCGTACATCTTGCTCATCTTGTTGCTGCTTCCGCTCTTCCCACGCAAATTTTCATGTCAAAATATAACTCTGGGTACAATTTTATCTCCATCCACTAACCGTTCATCTCTGCTCTCCCCCTCTGGAGATTTTGCTTTCGGCTTCCGTGCACTTGATACTGATCCATCGCTCTTTTTTCTTGCTGTCTACTACTACAAAATCAAGCCCAAAACTGTAATTTGGACTGCAAACGGGGGCAATCCTGTATCAAAGGAAGCCAAAGCTCAGCTTACATCAGACGGACAACTGACCTTACAAGACTCTTCAAATCAACAAATTTGGAGTTCGGATGTCGGTGGAGCAAGCTCTGGCTCCATGCGTGATGATGGAAATTTCGTACTCTACTCTAGTGCCTCTTCTCTAGTATGGCAGACGTTTGATTCTCCTACTGATACTATATTGCCTGGCCAAATTTTGAACCAAAATACCACTATTTTCTCAAAACTTACTGACGATGATTATTCAAAAGGAATATTTAAGTTTGTGATGCAGACTGATGGAAACTTGGTTCTATACAAACTATACTTTCCAACACGGACGGCTACCCCAGAAACAAGCTTCTATTCTACTGCCACACAAGGTAATCCAGGAAAAACTAGCTTTGTGTTTAATCAGACTGGGAGTTTGTACCTTTTGTTTACAAATGGTACTAGAGAAGAAGTGCTACAAGAACCTGTTCTAACTGGAGACAACTTTTTAAGGGCAACCTTGGATCCAGATGGTGGCTTCAGGCAGTATACCTTTCCCAAAACGCAGCCAACCGCTGTAACCTGGAGTATCGTAGCAAGCCTTTTTCAAGATCTATGCGGCCGTACATTCCGCATTGGAAGTGGGGTCTGTGGTTTCAATAGTTACTGCACACAAGATAACGGTGGATTAGCCAGTTGTACGTGCCCTCCTCACTACACTTTCATGGACCCAACCAGAAAATACAAAGGCTGCAAACCTGATTACGTTCCACAACTCTGTGAACAGGGCAGTGAATCATTTTTTGCTTTTGAAACCATTAAGAATCTTGATTGGCCAACTGCAGCTGATGCCGAAAAGCTTACGTCATTGAATGATACCCAATGCCAAAATGCATGCTTGAATGACTGCTTTTGTACGGTTGCTATATACAACAATGCTGGAACTTGCTGGAAAAAGAAGTTCCCACTTTCTAATGGAATATTAAGACAAAGTGTGGATACAGTAGCTTACATCAAGTATAATAAATTGAATATAAGTATTAATGGGTCTAGTACCATTACAAGTAGTGATGGATCGGGTAAATGGAGGAGGTTGATACTTATAGTATCATCAATTTTGGTTTGTTCTGTGGGTTCGAACCTTCTTCAAGTTTGTGCTTGTTTTTACATGCATAGAGAAAGAAAACGTGAAAGGGATTCAGCAAAGATAAGCAGTATTGTTTCAGTTTCCGCAACGTGTTCTTTCACATACAAAGAGCTGGAACAAGCTACTAAAGGATTTAGCGAAGAGCTTGGTAAAGGAGCTTTTGGTGTAGTCTATAAAGGAGTCATGCCTTCACAGTCTAATAATAATACACTTGTAGTAGCGGTCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGCGAGCAGGATTTCGAAAACGAAATTGCAACTATCGGCCAAACACATCATAAAAATTTAGTACAACTTATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTTGAGTTCCTCGGTAAAGGATCACTTAATAAGTACATTTTCGGAAGCAATCGACCCAGCTGGAATCAAAGAGTAAAAATTATTATTGGTATTGCCAATGGACTTTCATATTTACACGAGGAATGTAGAAACCAAATCATACATTGTGATATAAAGCCTCAGAATATACTTTTGGATGAGAATATGGAAGCTAGAATCTCGGACTTTGGGTTGGCAAAGCTGTTAAGGTTCGATCAGACACGAACAGCTACAGGCATTAGGGGGACTATAGGTTATTTTGCACCTGAATGGTTCAAGAACGTTGCAATTAGTGCAAAGGTTGATGTATACAGCTTTGGAGTGATGTTATTGCAAACAATCTGCTGTAAGAAGAATTTTGAGGGTGGATTGCAGAGTCATGAAAGAACAACAATTATAGACTGGGCAAAGAATTGTCTTAGGAATGAAAAGTTGGATTTGTTAGTCGAGGATGATGAAGAGGCAAAAAGTGATGTGAATAGACTAGAGAGGTTTGTGAAGGTTGGCATTTCTTGCGTTGAAGATGAGCCTTGGTTAAGGCCTACCATGAAGAAGGTTGTGCAAATGTTGGAAGGTACTACTGAGCCCATTATCTATTAA

Protein

Gene

>AfisC3G01277
ATGGCTTTCCATTCGTACATCTTGCTCATCTTGTTGCTGCTTCCGCTCTTCCCACGCAAATTTTCATGTCAAAATATAACTCTGGGTACAATTTTATCTCCATCCACTAACCGTTCATCTCTGCTCTCCCCCTCTGGAGATTTTGCTTTCGGCTTCCGTGCACTTGATACTGATCCATCGCTCTTTTTTCTTGCTGTCTACTACTACAAAATCAAGCCCAAAACTGTAATTTGGACTGCAAACGGGGGCAATCCTGTATCAAAGGAAGCCAAAGCTCAGCTTACATCAGACGGACAACTGACCTTACAAGACTCTTCAAATCAACAAATTTGGAGTTCGGATGTCGGTGGAGCAAGCTCTGGCTCCATGCGTGATGATGGAAATTTCGTACTCTACTCTAGTGCCTCTTCTCTAGTATGGCAGACGTTTGATTCTCCTACTGATACTATATTGCCTGGCCAAATTTTGAACCAAAATACCACTATTTTCTCAAAACTTACTGACGATGATTATTCAAAAGGAATATTTAAGTTTGTGATGCAGACTGATGGAAACTTGGTTCTATACAAACTATACTTTCCAACACGGACGGCTACCCCAGAAACAAGCTTCTATTCTACTGCCACACAAGGTAATCCAGGAAAAACTAGCTTTGTGTTTAATCAGACTGGGAGTTTGTACCTTTTGTTTACAAATGGTACTAGAGAAGAAGTGCTACAAGAACCTGTTCTAACTGGAGACAACTTTTTAAGGGCAACCTTGGATCCAGATGGTGGCTTCAGGTAATTTGTTTAATACATGCAAATGGGTGTGATTTAATATGACATACACCTTGTATACTACACTTAATCACCTTTGACCAAGTAATTACATATATATTCCAGGCAGTATACCTTTCCCAAAACGCAGCCAACCGCTGTAACCTGGAGTATCGTAGCAAGCCTTTTTCAAGATCTATGCGGCCGTACATTCCGCATTGGAAGTGGGGTCTGTGGTTTCAATAGTTACTGCACACAAGATAACGGTGGATTAGCCAGTTGTACGTGCCCTCCTCACTACACTTTCATGGACCCAACCAGAAAATACAAAGGCTGCAAACCTGATTACGTTCCACAACTCTGTGAACAGGGCAGTGAATCATTTTTTGCTTTTGAAACCATTAAGAATCTTGATTGGCCAACTGCAGCTGATGCCGAAAAGCTTACGTCATTGAATGATACCCAATGCCAAAATGCATGCTTGAATGACTGCTTTTGTACGGTTGCTATATACAACAATGCTGGAACTTGCTGGAAAAAGAAGTTCCCACTTTCTAATGGAATATTAAGACAAAGTGTGGATACAGTAGCTTACATCAAGTATAATAAATTGAATATAAGTATTAATGGGTCTAGTACCATTACAAGTAGTGATGGATCGGGTAAATGGAGGAGGTTGATACTTATAGTATCATCAATTTTGGTTTGTTCTGTGGGTTCGAACCTTCTTCAAGTTTGTGCTTGTTTTTACATGCATAGAGAAAGAAAACGTGAAAGGGATTCAGCAAAGATAAGCAGTATTGTTTCAGTTTCCGCAACGTGTTCTTTCACATACAAAGAGCTGGAACAAGCTACTAAAGGATTTAGCGAAGAGCTTGGTAAAGGAGCTTTTGGTGTAGTCTATAAAGGAGTCATGCCTTCACAGTCTAATAATAATACACTTGTAGTAGCGGTCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGCGAGCAGGATTTCGAAAACGAAATTGCAACTATCGGCCAAACACATCATAAAAATTTAGTACAACTTATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTTGAGTTCCTCGGTAAAGGATCACTTAATAAGTACATTTTCGGAAGCAATCGACCCAGCTGGAATCAAAGAGTAAAAATTATTATTGGTATTGCCAATGGACTTTCATATTTACACGAGGAATGTAGAAACCAAATCATACATTGTGATATAAAGCCTCAGAATATACTTTTGGATGAGAATATGGAAGCTAGAATCTCGGACTTTGGGTTGGCAAAGCTGTTAAGGTTCGATCAGACACGAACAGCTACAGGCATTAGGGGGACTATAGGTTATTTTGCACCTGAATGGTTCAAGAACGTTGCAATTAGTGCAAAGGTTGATGTATACAGCTTTGGAGTGATGTTATTGCAAACAATCTGCTGTAAGAAGAATTTTGAGGGTGGATTGCAGAGTCATGAAAGAACAACAATTATAGACTGGGCAAAGAATTGTCTTAGGAATGAAAAGTTGGATTTGTTAGTCGAGGATGATGAAGAGGCAAAAAGTGATGTGAATAGACTAGAGAGGTTTGTGAAGGTTGGCATTTCTTGCGTTGAAGATGAGCCTTGGTTAAGGCCTACCATGAAGAAGGTTGTGCAAATGTTGGAAGGTACTACTGAGCCCATTATCTATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241834.1	2.0e-244	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 isoform X1
Swissprot	Q7FAZ3.1	3.1e-186	OsRLCK134
trEMBL	A0A5P1FSN2	3.3e-241	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	33.38	6e-100	362		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01277	AT1G34300.1	797	439	29	22	784	23	761	33.38	6e-100	362
AfisC3G01277	AT5G60900.1	290	126	3	495	784	437	720	54.48	7e-91	332
AfisC3G01277	AT5G60900.1	447	250	13	3	426	9	421	31.32	1e-55	215

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	159	78.8	2.4e-22
PF00069.22	Pkinase	Domain	508	777	166.4	7.1e-49

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005488	F	binding
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network