result

Gene information

Detail information of AfisC3G01279

Location

Gene	Chr	Start	End	Strand
AfisC3G01279	chr3	225446534	225449169	-

Sequences

CDS

>AfisC3G01279
ATGAAGGCTTGGGAAACTGACAAATGTAAGAAATGTGTCAAAATGCAGGACATCCAGTGGATTAACCCTGCCAGAAAATACAAAGGTTGCAAGCCTGATTACATTCCGCAATTATGTGTACAAAATGGTGAATCATCTTTCGCTTTTGAAGCCATTGCGAATCTTGATTGGCCATTATCTGATGCCGAAAAGCTTACACCATTGAATGAAGCCCAATGCCAAGATGCATGCTTGAATGATTTCTTTTGTACGGTTGCTATATACGACAATGCTGGAACTTGCTGGAAAAAGAAGTTCCCACTTTCTAATGGAATGTTAAGACAAAGTGTGGATATAGTAGCTTACATCAAGTATAATAAATTGAATATAAGTATTAATGGGTCTTGTACCATTACAAGTAGTGATGGATCGGGTAAGTGGAGGAGGTTGATACTTATAGTATCATCAATTTTGCTGGAACAAGCTACGAAAGGATTTAGCGAAGAACTTGGTAAAGGAGCTTTTGGTGTAGTCTATAAAGGAGTCGTGCCTTCACAGTCTAATAATAATACACTTGTAGTAGCAGTCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGCGAGCAGGATTTCGAAAACGAAATTGCAACTATCGGCCAAACACATCATAAAAATTTAGTACAGCTTATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTTGAGTTCCTCGGTAAAGGATCACTTAATAAGTACATTTTCGGAAGCAATCGACCCAGCTGGAATCAAAGAGTAAAAATTATTATTGGTATTGCCAATGGACTTTCATATTTGCACGAGGAATGTAGAAACCAAATCATACATTGTGATATAAAGCCTCAGAATATACTTTTGGATGAGAATATGGAAGCTAGAATCTCGGACTTTGGGTTGGCAAAGCTGTTAAGGTTCGATCAGACACGAACAGCTACAGGCATTAGGGGGACTATAAGTTATTTTGCACCTGAATGGTTCAAGAACGTTGCAATTAGTGCAAAGGTTGATGTATACAGCTTTGGAGTGATGTTATTGCAAACAATCTGCTGCAAAAAGAATTTTGAGGGTGGATTGCAGAGTCATGAAAGAACAACAATTATAGACTGGGCAAAGAATTGTCTTAGGAATGAAAAGTTGGATTTGTTAGTCGAGGATGATGAAGAGGCAAAAAGTGATGTGAATAGACTAGAGAGGTTTGTGAAGGTTGGCATTTCTTGCGTTGAAGATGAGCCTTGGTTAAGGCCTACCATGAAGAAGGTTGTGCAAATGTTGGAAGGTACTACTGAGCCCATTATCTATTAA

Protein

Gene

>AfisC3G01279
ATGAAGGCTTGGGAAACTGACAAATGTAAGAAATGTGTCAAAATGCAGGACATCCAGGTTTGATGCAGCCAAACCCAGATGATGATGATGATCTGATGGGTTCTTGGCGTGGCACTTGCTTTCTTTTTTCTTTTGATGATTTTCTTGATTTTTGTTTATGGTATTCTAAGTTTTCTTGAATTGAATCTGATGTTTTTGAAAGAAAGCTTGTTGCGGCCAATGAATTCAGTGAGTTCCTTGGCAGGGTACTTGCAGATGATGAGATAATCTTTGATGGGTAATTTGATTATCAAATGATGAGATTTCTCAGATGATAATTCAGATTAATTCTCTCCACCTTTGTTGAGCAACTTGAATTGCTTTAGCATACAAACCTATTGCTGTTAAGCTTTGAGTTCTGATGGTATATTAGATTTTGATTATAATAGAATTGAGTTTTGAATTGATGCAAGAAATGAGAGAACAAATGTTTTATATTGCTCGTACAAAACTGATATTTTACAATTCGGCATGTATTAATGATCACAATATGAGTTTATGGGTCGAAGTGTGTAAATACCCAATATTAATTATTACACAATATTGTTATATGATACAACTACCGAATAACTCTGGGTAATATGAAGTATCGAAACTCTGGGTAATCTGGGTAATATGAAGTATCGATTTTATTCTTTTCCTTTTTTTTTCTTCTTTTAAGGTGAATTGTAGTTCCCCATGTTTATATAGCACTGCTCTCTTTAAAAACCAATAGCTCCAAAAGATCTTAGCAAAATTGAACTAAACATTGACCAGCTCCTCTTCCACAAAATTTAATGATTGAAGACTTTAAAGTCGTCGTTTGGTACGATGCATACAACTTGCTAACAAACAAAGGTTTGGTACGAATGCATACAAATCACCAACAAACAAATAATCATAATTCATAGTTTGTCATCCAAATGGCTTTCCATTCGAATTCGTACATGTTACTCATCTTGCTGCTGCTTCCGCCCTTCCCACGCAAATTTTCATGTCAAAATATAACCCTGGGTACAATTTTATCTCCATCCACTAACCGTTCATCTCTGCTCTCCCCCTCTGGAGATTCTGCTTTCGGCTTCCGGGCACTTGATACTGATCCATCGCTCTTTTTTCTTGCTGTCTACTACTACAAAATCAAGCCCAAAACGTACATTCATCGTTGGAAGTGGGATCTGTGGTTTCAATAGTTATTGCACACAAAGTGACAGTGGATTAACCCTGCCAGAAAATACAAAGGTTGCAAGCCTGATTACATTCCGCAATTATGTGTACAAAATGGTGAATCATCTTTCGCTTTTGAAGCCATTGCGAATCTTGATTGGCCATTATCTGATGCCGAAAAGCTTACACCATTGAATGAAGCCCAATGCCAAGATGCATGCTTGAATGATTTCTTTTGTACGGTTGCTATATACGACAATGCTGGAACTTGCTGGAAAAAGAAGTTCCCACTTTCTAATGGAATGTTAAGACAAAGTGTGGATATAGTAGCTTACATCAAGTATAATAAATTGAATATAAGTATTAATGGGTCTTGTACCATTACAAGTAGTGATGGATCGGGTAAGTGGAGGAGGTTGATACTTATAGTATCATCAATTTTGGTTTGTTCTGTGGGTTCGAACCTTCTTCAAGTTTGTGCTTGTTTTTACATGCATAGAGAAAGAAAACGTGAAAGGGATTCAGCAAAGATAAGCAGTATTGTTTCAGTTTCCGCAACGTGTTCTTTCACGTACAAATAGCTGGAACAAGCTACGAAAGGATTTAGCGAAGAACTTGGTAAAGGAGCTTTTGGTGTAGTCTATAAAGGAGTCGTGCCTTCACAGTCTAATAATAATACACTTGTAGTAGCAGTCAAGAAATTAGAAGAAAGCCTGCTTGAAGAAGGCGAGCAGGATTTCGAAAACGAAATTGCAACTATCGGCCAAACACATCATAAAAATTTAGTACAGCTTATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTTGAGTTCCTCGGTAAAGGATCACTTAATAAGTACATTTTCGGAAGCAATCGACCCAGCTGGAATCAAAGAGTAAAAATTATTATTGGTATTGCCAATGGACTTTCATATTTGCACGAGGAATGTAGAAACCAAATCATACATTGTGATATAAAGCCTCAGAATATACTTTTGGATGAGAATATGGAAGCTAGAATCTCGGACTTTGGGTTGGCAAAGCTGTTAAGGTTCGATCAGACACGAACAGCTACAGGCATTAGGGGGACTATAAGTTATTTTGCACCTGAATGGTTCAAGAACGTTGCAATTAGTGCAAAGGTTGATGTATACAGCTTTGGAGTGATGTTATTGCAAACAATCTGCTGCAAAAAGAATTTTGAGGGTGGATTGCAGAGTCATGAAAGAACAACAATTATAGACTGGGCAAAGAATTGTCTTAGGAATGAAAAGTTGGATTTGTTAGTCGAGGATGATGAAGAGGCAAAAAGTGATGTGAATAGACTAGAGAGGTTTGTGAAGGTTGGCATTTCTTGCGTTGAAGATGAGCCTTGGTTAAGGCCTACCATGAAGAAGGTTGTGCAAATGTTGGAAGGTACTACTGAGCCCATTATCTATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241834.1	5.1e-149	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 isoform X1
Swissprot	Q0JEU6.2	2.3e-114	OsRLCK135
trEMBL	A0A5P1FSN2	8.4e-146	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	43.61	4e-102	368	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01279	AT5G60900.1	438	226	7	7	436	296	720	43.61	4e-102	368
AfisC3G01279	AT1G34300.1	290	143	5	152	436	479	761	46.55	1e-71	267
AfisC3G01279	AT4G32300.1	288	143	6	152	433	488	766	45.14	3e-66	249

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	159	431	169.0	1.1e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0009506	C	plasmodesma
GO:0009556	P	microsporogenesis
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0010152	P	pollen maturation
GO:0031625	F	ubiquitin protein ligase binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network