result

Gene information

Detail information of AfisC3G01435

Location

Gene	Chr	Start	End	Strand
AfisC3G01435	chr3	258674116	258675048	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009613275.1	2.5e-86	AP2/ERF and B3 domain-containing transcription factor RAV1
Swissprot	Q8RZX9.1	3.9e-84	AP2/ERF and B3 domain-containing protein Os01g0693400
trEMBL	A0A1S4DFM0	1.8e-86	AP2/ERF and B3 domain-containing transcription factor RAV1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G25560.1	56.68	2e-86	315	AtTEM1;EDF1;TEM1	AP2/B3 transcription factor family protein

>>>Show top 3 blast result

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	37	84	24.7	1.9e-05
PF02362.18	B3	Family	164	248	101.7	1.6e-29

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009536	C	plastid
GO:0009741	P	response to brassinosteroid
GO:0009910	P	negative regulation of flower development
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0048366	P	leaf development
GO:0048527	P	lateral root development
GO:0048573	P	photoperiodism, flowering

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09287	RAV; RAV-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network