result

Gene information

Detail information of AfisC3G01565

Location

Gene	Chr	Start	End	Strand
AfisC3G01565	chr3	278096307	278097822	-

Sequences

CDS

Protein

Gene

>AfisC3G01565
ATGGTCATCAATGGAGAAAATATGGTCAGAAGGATATCTCTAATTCTAAACATCCCAGGTAATATTATTAGTTTTATTTCTTTGCTTCAGTTTTATGAAATTTGTCAATATTTGTATATATATAATGCATCAAATAATATGTACTTTAAAAAAATACAATCTTATAGGACATACTATAGATGCACACATAAAGAAGATCAAGGTTGCCTTGCAAGAAAGCAAGTCCAGTTGGTTTTGTACATACATCCAAATTAATATAATCCATCCTTACAAAGATTAGAACAATCTGTTTGTGAATCAGATATAATCCACAGTACATTGGAGTTTTTTGATCACTTTAATCTGGACTATCCAAAACATGATCGATTGGTCCATACTTATGGTCAAACCTTACTCTAGTAAGTTACTTGAGTAGTTGATATTTTCTACTAAAATGCGAACTCAACAAAGACCTATTTTCTCAATGATAAATCTGTACTGGATGGAAATGGCATTGTGCTAGGACCCAACTGCCTATATTGCTATAGGCAAATTGAGAGATAAATCAGGTATTTGTTTCTTATAATGTGAAGGTTCCCAAACATATCTCTGTTGAATAACTAGCTAACTACTATTAATTTCACTTAGAAATATTACCTAGTTAGGCAATTTTATATTACAAACACAAATGTGAACATGAAATGATTATTGAAGTACGTTATTAGAAGTGAACATTCCCACATGTTTTCTCCACCTCCACAAGTGGTATGTGATATTTTTGATCTAATTTGCCATATTATGATAGCCAAAAATAAATAAAATGGAATTGAAAACAAATTCAAGTTCCACTTCCGCCTAAATGTATAATTTTGATAAGAACAAATGCGCACATATACCATATTTGTCACACTAAGCTCCACTTTCTAACTTTGTATGGAAAAGATGTTGCAAGAGCTTTAAACACCAATATCTCTGTATGAGCACTCACACTACTAGAAAAGGCTAATATACCGACTATGAATGTCCCGTTTGGTTTGCTATTTTTAGTTTTGTGTTTTCGTCTAAACAAAAGCACCCTACTTACAGGGGAGTCAGGATGCGCAACTGGGGCAAATCGGTTTCAGAAATCAGAGAACCCAGAAAAAAGTCCAGAATCTGGCTAGGCACTTTTCCTACTGCAGAAATGGCTGCACGTGCACACGACGTGGCTGCTCTGACCATAAAAAGTGAATCTGCTTATCTGAATTTTCCAGAATTGGCATCGCAGTTGCCGAGACCAGCTTCTACTTCACCTAAAGATATTCAGGCAGCTGCTGCTAAAGCGGCAATGTTAGACTTCACTGACCTTAAAGCTAAAGAAAAGCAGGATTTACCAGCTGCTGCTGCTGCTAGCAGCGATGATGAGAACACACTCTTTGATCTGCCTGATCTTTTGCTTGATTTAAGAGAGAGTTTCAGTCGATCTAGTTCTTGGGTTTCTTTGGTCGATGATATTGAATTTCGACTCGACGAGCCTTTTCTTCTGGAGTACTACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	THU74292.1	2.7e-47	hypothetical protein C4D60_Mb04t31830
Swissprot	Q9SUK8.1	2.5e-37	Ethylene-responsive transcription factor ERF039
trEMBL	A0A4S8KG36	2.0e-47	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G44940.1	49.49	1e-42	169		Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01565	AT2G44940.1	198	54	4	60	211	96	293	49.49	1e-42	169
AfisC3G01565	AT4G16750.1	155	53	3	60	214	36	179	58.71	4e-38	154
AfisC3G01565	AT4G32800.1	91	22	0	59	149	14	104	75.82	3e-37	151

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	63	111	35.6	7.7e-09

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009793	P	embryo development ending in seed dormancy
GO:0009825	P	multidimensional cell growth
GO:0009873	P	ethylene-activated signaling pathway
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network