result

Gene information

Detail information of AfisC3G01635

Location

Gene	Chr	Start	End	Strand
AfisC3G01635	chr3	288363558	288365131	-

Sequences

CDS

Protein

Gene

>AfisC3G01635
GAGAATTTATTTCTTTTCTTTTCTTCCTACTCTCTTCTTCCTGCTCTTTTCTTCTTCTCTTTGATGCTTTATGTTTACACTTGATTTTCATCAATTTTTCATCTTTCTTGGTGCTATTTTCTATAACTGATATTCTCCAACTTATCATAAATTATATATAAGTTTTTTGTATAAATGGTAAATTCTTGGATGGAAGCTCTGACACCAAATTCAGATTATATTTTAAGCCCAAACTGGGTTTCCACAGAGAAAAAAAGTGGGAAATGGAGCAAGGAGGAAAATAAAATGTTTGAGAATGCACTGGCATGCATCGATTTATCAAAACCTGATAGGTGGGAAAGAGTGGCAGAAGTGTTACCAGGAAAATCAGTAAGTGATGTAATTTCTCACTATAAAGATTTGGAAGAAGATGTTAATCATATTGAAGCTGGTTTGATCCCATTACCTGGATACAGTTCTTCATCTTTTTCATTCGGATTTGATGAAATTAAGCAATCATACAATAGTGTTCATAGGAAAAGAGGTAGACTTTATGATCAAGAAAGAAAAAAAGGGGTTCCTTGGACTGAAGAAGAGCACAGGTATTGTTATTTTTTTTATTTTATTTTTTTCCTCTCTCAATAATCTATATATTGAATTCAAAGCTAACCATATGTCTTATTTTGGAGTGTAACATAGAATTTTTTTTATCATATGATCGCGCAGACAATTTCTGATGGGTCTCAAAAAGCATGGAAAAGGGGACTGGAGAAACATATCACGAAATTTCGTGCTAACAAGGACTCCAACTCAAGTAGCTAGTCATGCACAAAAATATTTTAACAGGCTTAACTCAGTTGGCAAGGATAAGAAGCGTGCTAGTATTCATGACATCACAATTGCCGACCTATTGGAAGATAGTAGTCTTTCTTCAGGAACAACCAAAGTAGCAGACTCTAATCAGATCAAGGAAGATATCGAAGGATACAATAAAGGATACATGCAGCTACGCAATGACAGTGCATATCCATTTGGAATAACACTGGAACATCAAAACTCATACAGAGGAGGATTTCATGATGCTATGTTGGAAATCAGATGATGCTTCCAGAAACATGAAGTCGGTATTTCAATGCTCGTGTAAAACCTCAAATGTCAAAATGCAATGTAGATAATGCTTTAATGTGGTTTTATTTAGTGTTTCTATTTAATGGTTTAGAAGTTTAAGAATATGAAATTATGTCTGTTTTTTTACTGGTAACTGGGCAAACATGCAGTTTACCTTATTGAACCTTGTTTATTGTTTTCCAGTCTGTAACTTTGAACATTTCAGCATCTTAATTATACCTAAGAGCTTCCCAAACAGTTTTGATGAGATCAGCTATGGCATAGGCAGGACTGATTAGAAAATAGAAAATTCACCCCAGATAATTCCCCAGTAGAAAATTCACTCCAGATGCACGTTGCGCGTTGAACAGCCTTATATTAGGTGTCTGTTCATCAAATGCATACAATGTTCTTAATTTAAGTTGGTTACTAATGTCAACTTGAGCCAAGCCATTCTGATTATTTCCAAATATAAACCTCTATTCAAT

Functional annotation

Database	accession number	e-value	annotation
nr	QBM06253.1	1.8e-77	DIVARICATA 6, partial
Swissprot	Q8S9H7.1	5.5e-63	Transcription factor DIVARICATA
trEMBL	A0A482DHQ7	1.3e-77	DIVARICATA 6 (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38090.1	57.35	7e-65	243		Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01635	AT2G38090.1	211	74	3	2	197	1	210	57.35	7e-65	243
AfisC3G01635	AT5G58900.1	229	83	4	6	215	1	228	55.02	4e-64	241
AfisC3G01635	AT3G11280.2	171	57	2	31	198	33	197	61.40	2e-55	213

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	29	76	27.0	3.2e-06
PF00249.28	Myb_DNA-binding	Domain	129	173	48.4	6.7e-13

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001671	F	ATPase activator activity
GO:0003682	F	chromatin binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042393	F	histone binding
GO:0005829	C	cytosol
GO:0005654	C	nucleoplasm
GO:0006259	P	DNA metabolic process
GO:0008270	F	zinc ion binding
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009723	P	response to ethylene
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009787	P	regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0010116	P	positive regulation of abscisic acid biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030307	P	positive regulation of cell growth
GO:0030308	P	negative regulation of cell growth
GO:0030544	F	Hsp70 protein binding
GO:0031965	C	nuclear membrane
GO:0043130	F	ubiquitin binding
GO:0044822	F	poly(A) RNA binding
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:0051083	P	'de novo' cotranslational protein folding
GO:1900034	P	regulation of cellular response to heat
GO:1901001	P	negative regulation of response to salt stress
GO:1901371	P	regulation of leaf morphogenesis
GO:2000469	P	negative regulation of peroxidase activity
GO:1905615

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network