result

Gene information

Detail information of AfisC3G02356

Location

Gene	Chr	Start	End	Strand
AfisC3G02356	chr3	411628821	411630137	+

Sequences

CDS

Protein

Gene

>AfisC3G02356
ATGTTCACTCCTTTTTTCCCAAGCTATGGCCATAACAGGATCAAAGCCAGTTGGCCTCCAGATAAAGTATCAGACACCTCAGAGGTTGTTTTGTGTCTTATTACTGAACTTGCGTATCATTTAATTCATTACCCTCTTCACTCGACCCTCTTAGGTAGTGTATTACAATTCTTTTACGTTGTAATTTTCAACATTAATCGGTATATTTTGATGAAAGTACCGGAATTCGCAAATCGAAATTAGAGCGGAATTTCTGAAATTTCCTAAACGGGACTGAAATTTTAGAACTTTCTGAAGACCAGAATGGAAGTGGATGATAGAATTTTGAACCTTGGTGTATACATTTATGCATGTTCTATTCGATATATAAATGGTGCTTACAGACGTTCGAAGCTAGTGTTACTTGAAGGATATAATCCCGAACAAATAGGCTACCATACTCAAATATTTTATTTTAATTATCTATTGTCAAAGCAGAATTGGTTGCCCTTTTTTGGGTGAAAAATTACAACTTGGTGTCCTATACTTAGATTTTCAGTCTGACCGTTTTTTTATGTGTAGGTTTGCAAGTTTTTTCTGGATGTAGTAGAAAAGAAACAATATGGTTGGTTTTGGGTATGTCCAAATGGTGGCAAGGAATGTTGTTATAGGCATGCTTTACCCCCGGTATGTCCTCAAATCTCAAATGAAGGCATTGTTGGCAGAAGAGTCCCAACAGATATCAGTTGAAGAGGAGATAGAAAACCAAATAATAATCATTAATCAAATTCATGTTCAGCATTTTTGTTATCAAGTGGTCGAAAACCTTGTTGAACCAATTTTATGATTGTAATATCTGATGGGGTATCGTGAAATTTGATAAATTAATCATGGTATAATTGCAATCCGAAGTATATGAGATTATCATACTATTATAGTAACCTTGTTGACAACTAACCTAAAAATAAAATCATATTCTATAGCATGCCAAAATTGCTACTACCACTCCTATGACTCCTGAGCTATTCTATCAGTGGAAAAATAAAAGGATGGATGAAAGAGAGGCTGGTATTGCTGCAAAACAGGCCGAAAGAGCCAAAAATGACAGAATGAGGTTATTAAATTAATTGTGCAAATTTTACTTGGATGTAAAATTTACATTTTTTATTAGATAATTAACGTGCCAAAATACATCTTTTCAGCAGCCGCGAGCTGTTTATGGCTGATGCTAGTTTGTTTGTTGACGACGATGATGCTGAAGCGTATGAGAAATACCGGAAAGATTACTCTGAAGCTGAAAAAACAGTAAATAAATATCTTCTCATTTTATCTTTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267396.1	2.6e-44	zinc finger CCCH domain-containing protein 11-like
Swissprot	Q0JHZ2.2	3.9e-37	Zinc finger CCCH domain-containing protein 11
trEMBL	A0A5P1ET01	1.9e-44	C3H1-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G20280.1	57.14	8e-37	149		Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G02356	AT2G20280.1	126	25	1	26	122	161	286	57.14	8e-37	149

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF16543.2	DFRP_C	Domain	69	138	51.3	1.2e-13

Gene Ontology

Accession	Ontology	Name
GO:0005739	C	mitochondrion
GO:0005730	C	nucleolus
GO:0019221	P	cytokine-mediated signaling pathway
GO:0044822	F	poly(A) RNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network