result

Gene information

Detail information of AfisC3G03917

Location

Gene	Chr	Start	End	Strand
AfisC3G03917	chr3	701926276	701927732	-

Sequences

CDS

Protein

Gene

>AfisC3G03917
TGCACACATATAGAATTTATGTCAAATAAAAAATGATCAACCACTTATATAACTATGAAAAAAGTACGATAAAAGTTCTGTCAAAGTTAAGAAACAAAAGCTATAATTTGAACCCGTAAACATCAATGTGAAAGATATTTCTTAAATATACAGTGATTTCAGAAATGTCAAAAGTAATGTATTTTTAGCTATTCAGAATTAGTATATATGGTTGAAGTTATTACGTACGAGACAGAATCCCACAAATCCATCTCCATTAAAACCTTTAACTGATAAAGCAATGATGATGCAATCACCCATTTAATATTTGGAACTAAACCAGATCGCCATATCTTAAGTAAATCATTTCAAAATAGACATAAGATACCTTATCTCTTTTAACTCTCTCATGAACCTCTATAAATATCCCTCCATTTTCTCTTCGATTTCCAGCTATAGCTCCCTAAAGCAAATCATCCAATATATAATGTCAGCATCAGAGAGTGATGTTCATGTCTTGGCAGTGGATGATAGTTCAGTAGATCGGGCAGTGATTGCACACTTGCTTCGCAGCAACAAATTCAGAGGTTCTTTTTTTAAAACTTGCTTCAATATATATTTTTTTGAGGGTCGATTTTGCAATATCATCTCACTCTGTTTGGGGATTGCAGTGACTACAGTTGACAGCGGGAGACGAGCACTGGAAATGCTGAACGTGGTTTGTAGTTCCTTTTTCACTTATTTTAAACTTCTGGATAACTGTTTAATTTCGGTTTGTTTACAAGTGTGTGATGATGCAGGAACCAAATGTGAATATGATAATCACTGACTATTCCATGCCTGAAATGACCGGTTATGAATTGCTAAAGGAGATCAAGGTATATTTTTATTCATACTTTTTTTTTTCAAATATTTTTATGATTATACAAATGGATATAGTTTAACATAGTTTAAGTCATATTCTTTGTTAAGCAGTGTTCTTCGCGGCTCAAGGAAATTCCGGTCGTGATTATGTCATCCGAGAATATTTCTGTTAATATCAACAGGTAACAACGTGATAAATATAGATGATATAAGTTGTACAATTAATTATTTGAGTAGTATTGTAGTCTAGCTTAATTTTTGAAATGTTAGATGCTTGGAAGAAGGTGCTGATGATTTTCTGTTGAAGCCAGTTCGAATGTCGGATATGCCACGATTAACACGTGTGCTGCAAAGTGTACGATGAATTACCAGTGGAATATTACTATCGTGAGATGAGGGACGTGTTAAATAAATGATTTACCAGTGGAATGCAAAGCTAATTTGATGTTAGGGTGATCATTTTTTTCCTTTATTTATTATTACAGAAAAAATAGTTTCAGAAGATTGGCTTATTGACTATGAGGTATTTGAATTTTAAAATTGTCTTGGGAATTTGATGGAGATGAAGTGAACTTACCATTTTAACTTGACAAACATGGTAAGGGAAAATAAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263838.1	6.6e-43	two-component response regulator ORR5-like
Swissprot	Q2HWH1.1	3.4e-44	Type A response regulator 5
trEMBL	A0A8B7D4X8	6.2e-43	two-component response regulator ORR5-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G59940.1	61.29	1e-36	148	ARR3	response regulator 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03917	AT1G59940.1	124	38	1	34	147	33	156	61.29	1e-36	148
AfisC3G03917	AT1G10470.1	125	39	1	33	147	33	157	60.80	2e-35	145
AfisC3G03917	AT5G62920.1	136	48	1	29	154	20	155	57.35	5e-35	143

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	36	144	86.8	9.6e-25

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009793	P	embryo development ending in seed dormancy
GO:0010161	P	red light signaling pathway
GO:0042752	P	regulation of circadian rhythm
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14492	ARR-A; two-component response regulator ARR-A family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network