result

Gene information

Detail information of AfisC3G04555

Location

Gene	Chr	Start	End	Strand
AfisC3G04555	chr3	816662372	816664895	-

Sequences

CDS

>AfisC3G04555
ATGCTCACGCTAGTAATCATCCCATCAATAGTTCCATGCGCTTTCGATCAAAGTAGAGGTTTCCGGAAATGCCCATTTCATCTATTGCATCAAAATACAATATTTTCCATCAAATTCCAAAAACCAAGATTATTCACTAATTCTGTTCAAGTACCCTATGCAAACAAAGTGTTCAATTATCATAGGAAACAATATCATTCAGCAATGAGCACAAGCCTGCTACAGAATGGGTCAAAAATTTCACGGCTTAGCAGACAAGAAGCACAAAAGGCTCTCTTTGAGTATCTTCACGGCACTAGGAGTTTCAATTATACTGATGCTGAGCATATGAGCAAGAATTCACCTATGTTTCTTAACGGTATTTTGTCAAAGTTTGAAAATGAAGATGATGTTGGTAGGTCGTTAGCTAGATTTCTTAGGTATCACCCGATTAATGAGTTTGAGCCTTTCTTTGAAAGTTTGGGTATGGAACCATCTGATTTGGATTCAATTCTTCCGAAGAATTTGATTTATCTCAGCGATGACGATATATTGCTCGAAAATTACAATGTTTTATGTAATTATGGTGTTCCTCGGAGTAAAATTGGTAAAATGTATAAAGAAGGAATGGAAATGTTTAGATATGACTTAGGAGTTCTGTCTACAAGGTTACAATATTATGAGAAACTTGGGTTAAGTAAACCAACTATTATTAAGTTGGTAACTTGCTGCCCGAGACTTTTGGTTGGAGACATTGATGTTAACTTTTTAAATGTGCTTGAGAAACTAAAGAGTTTTGGGGTTGAATTGGATTGGATTAAAGGTTCTTTATCAGATAAGAACAAATACGATTGGTCTTGGATTCTTGAAATGCTGCATTTCTTAGATGGTATGGGATGCAATAAAAATAAATTATCCATGTTTATTAAATCGCATCCAAGATTTATTTTAGATGACTCCGGGAAAAATATTTATATCCTTGTAGACATTTTGTTAAAACTGGGTTTAAAGAGGGATGAATTGCTACTATTTTTTGAGCAATACCCGCGGAGTCTAACTGGAAAATTCACGATGAATTTGTGGAAATCTGTTCAATTTCTTTCTGAGATTGGAATGGAAAACATGCAAATTTCCATCATTGTATCTAAGCATGCTCAAGTTTTAGGCTCTTCTTGTTGTCGTCAACCAACTTATGTCCTAAAAATATTAAATTTGTCTGCCAAGAAGTTGGTTGAGCTTATAGAAAAAGATCCAAGCCAGTTCAGTGCTTTAACTTCAAGGAAAAAGATCAGTACCTGCTTACCTAAAACAGAAGGAACATTTCTTAAGGAGAAGACTGATTTCTTATTGCGAATCGGCTTTGTTGAGAACTCAGATGAGATGACAAAGGCCTTGAGTAAGTTTCGGGGAAGAGGCGATCAACTTCAAGAAAGGTTTGATATTTTAGTTAATACTGGTTTAGATTCCCACACAGTTTCAGAGATGATTAAGTCGGTACCTTCAATTCTTAACCAAACGAGTGACGTAATACAAAAAAAGATCAATTATCTCTTAAATCATTTAGGTTATCCATTAGAAGCAATCGTGGCTTTTCCAACATGTTTGTGTTATAATCTTGAGAAGATAAAGTTGCGCTATTTCATGTACATGTGGCTTAGAGAGAATGGTGTAGTGATAGCTACAAAAAATAGGAAAATGGTGAGCTCTAATGCAGCTTTGAGTACACTTCTTGCATGCTCAGATGAACGGTTTGTAAAATATGTTGTTAGTCTACATCCTGAAGGAGCTGATGTTTGGGAGAATTTGAAGAATTTGATTCCTTTGACATAA

Protein

Gene

>AfisC3G04555
CGGCGATCCCCAAATTAATAGCTTCTTCAACATTATCTTCTCCCCTAAACCCCACAAAAGTTTTTAAACCCCCAGCTCAGTTCTTGCCAAATCCGCAACGATTCGTTCCAAATTCTTATTCTTATTCAATATCAAGGTATGCGAATACTTCAGTGTTCCTAAATGTGTTGATGTTTATTCGTTTTTGAAATCTTCTTACCGCTAGTCATGATAGTTTACAAACATACAAAATGCTCACGCTAGTAATCATCCCATCAATAGTTCCATGCGCTTTCGATCAAAGTAGAGGTTTCCGGAAATGCCCATTTCATCTATTGCATCAAAATACAATATTTTCCATCAAATTCCAAAAACCAAGATTATTCACTAATTCTGTTCAAGTACCCTATGCAAACAAAGTGTTCAATTATCATAGGAAACAATATCATTCAGCAATGAGCACAAGCCTGCTACAGAATGGGTCAAAAATTTCACGGCTTAGCAGACAAGAAGCACAAAAGGCTCTCTTTGAGTATCTTCACGGCACTAGGAGTTTCAATTATACTGATGCTGAGCATATGAGCAAGAATTCACCTATGTTTCTTAACGGTATTTTGTCAAAGTTTGAAAATGAAGATGATGTTGGTAGGTCGTTAGCTAGATTTCTTAGGTATCACCCGATTAATGAGTTTGAGCCTTTCTTTGAAAGTTTGGGTATGGAACCATCTGATTTGGATTCAATTCTTCCGAAGAATTTGATTTATCTCAGCGATGACGATATATTGCTCGAAAATTACAATGTTTTATGTAATTATGGTGTTCCTCGGAGTAAAATTGGTAAAATGTATAAAGAAGGAATGGAAATGTTTAGATATGACTTAGGAGTTCTGTCTACAAGGTTACAATATTATGAGAAACTTGGGTTAAGTAAACCAACTATTATTAAGTTGGTAACTTGCTGCCCGAGACTTTTGGTTGGAGACATTGATGTTAACTTTTTAAATGTGCTTGAGAAACTAAAGAGTTTTGGGGTTGAATTGGATTGGATTAAAGGTTCTTTATCAGATAAGAACAAATACGATTGGTCTTGGATTCTTGAAATGCTGCATTTCTTAGATGGTATGGGATGCAATAAAAATAAATTATCCATGTTTATTAAATCGCATCCAAGATTTATTTTAGATGACTCCGGGAAAAATATTTATATCCTTGTAGACATTTTGTTAAAACTGGGTTTAAAGAGGGATGAATTGCTACTATTTTTTGAGCAATACCCGCGGAGTCTAACTGGAAAATTCACGATGAATTTGTGGAAATCTGTTCAATTTCTTTCTGAGATTGGAATGGAAAACATGCAAATTTCCATCATTGTATCTAAGCATGCTCAAGTTTTAGGCTCTTCTTGTTGTCGTCAACCAACTTATGTCCTAAAAATATTAAATTTGTCTGCCAAGAAGTTGGTTGAGCTTATAGAAAAAGATCCAAGCCAGTTCAGTGCTTTAACTTCAAGGAAAAAGATCAGTACCTGCTTACCTAAAACAGAAGGAACATTTCTTAAGGAGAAGACTGATTTCTTATTGCGAATCGGCTTTGTTGAGAACTCAGATGAGATGACAAAGGCCTTGAGTAAGTTTCGGGGAAGAGGCGATCAACTTCAAGAAAGGTTTGATATTTTAGTTAATACTGGTTTAGATTCCCACACAGTTTCAGAGATGATTAAGTCGGTACCTTCAATTCTTAACCAAACGAGTGACGTAATACAAAAAAAGATCAATTATCTCTTAAATCATTTAGGTTATCCATTAGAAGCAATCGTGGCTTTTCCAACATGTTTGTGTTATAATCTTGAGAAGATAAAGTTGCGCTATTTCATGTACATGTGGCTTAGAGAGAATGGTGTAGTGATAGCTACAAAAAATAGGAAAATGGTGAGCTCTAATGCAGCTTTGAGTACACTTCTTGCATGCTCAGATGAACGGTTTGTAAAATATGTTGTTAGTCTACATCCTGAAGGAGCTGATGTTTGGGAGAATTTGAAGAATTTGATTCCTTTGACATAATGTGTACTTACCACATATCTCTGCCAAGACATGGTACAATGAATAGCTGAAGGATGACTTTGGTGCACTTGATTACACATATGAATAAACTCTGATTTTTCTCTTGAACTCGCTGGACAGTTTTGATATTCTTACTCCCATATTATGTTTATTTATCCTTACATAAAATTTTGTAGTTCAAAGGTGTTTTAGAGCTGCTACAGCTGAAGATTCATATATGAAAGAGATTCTACTTTATGTACGTTCATTCTTATCATTTAGCCATGGATGATTCTTGCCCTCTCTTACAGCTGTTGATTTGTGGTAAAGATATTTCTCTTTTTCTTTGTGTTTTCAAAGACCTAAGAAAAGGTTGAAACTTGGTGTAGCCATTGAATCAGAATAACTTGCTGTCATTGGCATCCTTGTGAAAGCTTCTGTACTTCATTTCAAATGGGAAATGATTAAAGAAAAATTCAACCTCGAATTTTTTTTTTTTTTTTTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263488.1	4.7e-206	transcription termination factor MTEF18, mitochondrial-like
Swissprot	Q9M219.1	3.2e-42	Protein SUPPRESSOR OF HOT1-4 1
trEMBL	A0A5P1FUF4	3.4e-206	Transcription termination factor MTEF18, mitochondrial-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G19650.1	46.48	7e-133	471		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04555	AT4G19650.1	525	262	7	78	595	58	570	46.48	7e-133	471
AfisC3G04555	AT5G06810.1	527	298	5	85	599	623	1139	39.28	3e-109	392
AfisC3G04555	AT5G06810.1	508	298	6	75	578	65	561	38.39	3e-104	376

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	150	246	26.6	2.5e-06
PF02536.11	mTERF	Family	285	448	58.0	6.8e-16
PF02536.11	mTERF	Family	435	577	58.9	3.6e-16

Gene Ontology

Accession	Ontology	Name
GO:0006996	P	organelle organization

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network