result

Gene information

Detail information of AfisC3G04823

Location

Gene	Chr	Start	End	Strand
AfisC3G04823	chr3	859243283	859248518	-

Sequences

CDS

>AfisC3G04823
ATGCCTTCTAACATGTACATGTACTCAGTAATGAATATGAAGTTTTCATTTTTCTTACTCATCTCTCATCTTTTCTATCATTCTTTTGCCACAGACCTTATATCTCCAAATCAAAATTTATCCGAAGGAGAACGACTAGTTTCATCAGGCAGGAAATTCGCACTCGGATTCTTCAGCCCCACGAACACAAGCAACAAATATATCGGTATCTGGTACCATAACATCAAACCACAAACTATAGTATGGGTTGCTAATCGCAATATTCCAGTCACAAAACATAGCATGAGTGTAAGTTTAACAATATCTCCTAATGGCACTCTTTCTATAAATGCTAATGGCACCTCTTCCATCATCTTGTTTCTGCCGTCTTCATCCGTACCCAATCCAATTGCACAGTTATTAGACACTGGAAACTTCATCGTTCGGGATTCTAAAAACGATAAAGAAGGTACGTACGCATGGCAAAGTTTCGACTACCCAACTGATACGCACCTGCCACACATGAAGTTAGGCTGGGACCTAACTACAGGCTTGGCCCGTAACCTCACTTCATGGAAATCCGAATCCGACCCGTCTCCAGGCTCCTACACTCTTGCCATAGACATCCGCGGGGCTCATGAGTTGTCCCAGTTTGACGGCGCCGAACGGGTCTGGAGATCCGGAATGTGGAACGGGTTAGAATTTAGCGGGTTGCCCGATTTCAACACCTACGGTGACTACAACTTAACATTTATAAACACCACTTCAGAAATATCATTAGAATACAAAATGACCAACCCTTCAACGCTTGCAAGATCGGTAATCACATACAACGGAGTAACGAATAGGTACATATGGGTCGACAGTTCGGGTGCATGGAACTTAGTATGGTCTGCGCCTAGTGGTAGGTGTGATAAGTTCAATGTATGTGGGGCGAATGCTAAGTGCAACCCGAGCACGTTGCCTGTGTGTGAGTGTTTTCATGGGTTTGGGCCTAAAAGCCCAGCGGACTGGGCTTTGAGGGATACGGGCGAAGGGTGTGTACGTAAGACTGGGCTGGACTGTAGGAATCGGACTGACCGTTTTTTCAAGATGGAGCATGTAGTGCTGCCTGATACTTTAAGTGCAACTATTGATGCAAGTATTATAAGCCTTGATGACTGTAGAGAGAGGTGTTTGAGGAACTGCTCTTGTACTGGGTTTGCGAATTCGGATGTGCGTTCTGGTGGAAGTGGTTGTGTTATATTTGTTTCTGATCTTAATGACGTTGGTGATCTTGGGAATGATGGTCAGGATTTCTATCTCAGGTTGGCTGCAGCTGATGTAGGTCTGTCGCCAACACAAAGCAATTCTAACAAGAAAGAGAGTAGAATCATAGCAACAACAGTGAGCCTTGTTGTCGGGACTTTATTGGTTGCCTGCATCATGTACTGCATATGCAGAAAGAAGAAAAGAATTAGAAAAGATCTATATAATGCAGAGAACTGGTATGAGGAAAGTAAAATGGAAGATGAAGATCTAGAGCTACCATTATATGATCTAGAGACCATGGTTGCTGCTACTGATAATTTTGCGGTTGCTAATAAACTTGGAGAAGGTGGATATGGTCCAGTGTACAAGGGTATCATACAAGGGGACAAAGAAATTGCAATCAAGAGATTGTCTAAAGATTCCAACCAAGGAATTGATGAATTTAAAAACGAGGTTTTATTGATCGCAAAACTTCAACATAGAAATCTTGTCCGACTGTTGGGTTGTTGCACACAAGGGGAGGAGAGAATGCTAATATATGAATATATGCACAACAAAAGCTTGGATGCTTTTTTATTTGATAAAGCAAGGGACGTAAGCTTGGATTGGCCAACACGCTATCATATTATTACAGGAATTGCACGAGGGCTTCTGTACCTTCATCAAGACTCTAGGTTTAGAATAATACATAGGGATTTAAAAACTAGCAATGTTCTTCTTGACAAAGATATGAATCCCAAAATTTCAGATTTTGGCCTAGCGAGAATTTTTGGTGGGGATGAAGCAACCACCAGGACAAGACGGGTGGTTGGCACATATGGTTATATGTCTCCTGAGTACGCAATGGATGGCATTTTCTCTATCAAATCTGATGTGTTTAGCTTCGGAGTTATAGTACTTGAAATTGTAAGCGGACAAAGAAGTAAAGGCGTGTTCCTTGCTGAACCAGAGTCTAATCTTTTAATGAAAGCATGGCGTTTATTGACTGAAGACAGAGGAAAAGAACTAATTGACCCATCCATGGGTCATGACTTCCCCTTGGATGAAATTATAAGATGTATAAAAGTAGGCGTGCTATGCGTACAAGAAAATCCTGAAGCCAGACCAACAATGTCATCAGTGGTGGTCATGTTGAGTGATCATCAAGATGCATCGGTTTGTCAGCCACAGGAACCGGGGTTTGCAGCAAGAAGAAATCTATCTTTTCCAAATTCTCCTTCAAGTAAACATGATATATTTACTGGTAATAGCATCTCCTTTTCAATGGAAGTGGGTAGATGA

Protein

Gene

>AfisC3G04823
TCTAAGTCAATTATAGCACCTACTACTTGCACACAATTGACTAATCCAATCAAGTTCTTATATGCCTTCTAACATGTACATGTACTCAGTAATGAATATGAAGTTTTCATTTTTCTTACTCATCTCTCATCTTTTCTATCATTCTTTTGCCACAGACCTTATATCTCCAAATCAAAATTTATCCGAAGGAGAACGACTAGTTTCATCAGGCAGGAAATTCGCACTCGGATTCTTCAGCCCCACGAACACAAGCAACAAATATATCGGTATCTGGTACCATAACATCAAACCACAAACTATAGTATGGGTTGCTAATCGCAATATTCCAGTCACAAAACATAGCATGAGTGTAAGTTTAACAATATCTCCTAATGGCACTCTTTCTATAAATGCTAATGGCACCTCTTCCATCATCTTGTTTCTGCCGTCTTCATCCGTACCCAATCCAATTGCACAGTTATTAGACACTGGAAACTTCATCGTTCGGGATTCTAAAAACGATAAAGAAGGTACGTACGCATGGCAAAGTTTCGACTACCCAACTGATACGCACCTGCCACACATGAAGTTAGGCTGGGACCTAACTACAGGCTTGGCCCGTAACCTCACTTCATGGAAATCCGAATCCGACCCGTCTCCAGGCTCCTACACTCTTGCCATAGACATCCGCGGGGCTCATGAGTTGTCCCAGTTTGACGGCGCCGAACGGGTCTGGAGATCCGGAATGTGGAACGGGTTAGAATTTAGCGGGTTGCCCGATTTCAACACCTACGGTGACTACAACTTAACATTTATAAACACCACTTCAGAAATATCATTAGAATACAAAATGACCAACCCTTCAACGCTTGCAAGATCGGTAATCACATACAACGGAGTAACGAATAGGTACATATGGGTCGACAGTTCGGGTGCATGGAACTTAGTATGGTCTGCGCCTAGTGGTAGGTGTGATAAGTTCAATGTATGTGGGGCGAATGCTAAGTGCAACCCGAGCACGTTGCCTGTGTGTGAGTGTTTTCATGGGTTTGGGCCTAAAAGCCCAGCGGACTGGGCTTTGAGGGATACGGGCGAAGGGTGTGTACGTAAGACTGGGCTGGACTGTAGGAATCGGACTGACCGTTTTTTCAAGATGGAGCATGTAGTGCTGCCTGATACTTTAAGTGCAACTATTGATGCAAGTATTATAAGCCTTGATGACTGTAGAGAGAGGTGTTTGAGGAACTGCTCTTGTACTGGGTTTGCGAATTCGGATGTGCGTTCTGGTGGAAGTGGTTGTGTTATATTTGTTTCTGATCTTAATGACGTTGGTGATCTTGGGAATGATGGTCAGGATTTCTATCTCAGGTTGGCTGCAGCTGATGTAGGTATGTGTGTGTAATTTTTTCAGTTATAACCTTTACTATACTCCAGTACATGAATGTTATCTGTCTTCTAAAAGATGTTAAATTATTTTTCTATCTTGATCACAAATGGACAAAATGAAACACTTTTTTGTCCATACAGATAGAAGTTGATGACGATTGATGAAGAGATGCAGCTGTTTGTGTTAAAACAGTCGTATGTGTTCGAAAATTATGAGTAGTGAGTTTCAATGGCCATATGCCCACTATTTCACCTTCTCGACCACTGGTTAGGCAAAATATATTTGAATGGGCATAATTTAATAATTATTCCATATTATGTACCAACATTTTACCAACATTTAATGTATCATCAATATCATCCACATATAATAATGTGGAATTAGACAAAGTAATGTGAAATGAAGAAAAATATTGATTTTCTATAGTCAATTTTAAAATAGTATTCTCTATTTTCATAGTAGTTGACTCACATTTCAAAACACATTATGCAGCTTCCTCCCTTTTAGTTAATTACTATTTTATTGATGTTTAGAGCTTAGAAGACACATTACGTAGTTTTTTTTTCCGGTGTGTTACTAGTACTTGATGCAATGTTCAAATTATTTTTGGTATCATTGACTTAGCAACGTACCTTTAAAAATATATTTTTAACCAAACAGTTGCCAGCATCAATGCATAATTTGTATGCTTTTTTTTCTTTTCGTTTCTTTTCCCCCCTTTTTTGTTTGATTTTGACTTTTGAAATCTTCCAATTTCCAACTATTGTTAGTTGCACAACTCAGGCAGCCATTTTTTATTTCTTTAAATAATAATCAAAGATCAATACAGACAGATACTTTTCATATTATGAAACCAGACGTGCATATATTCATGGGATGTTTTAGACTGGCTCTTGGAACTGCATAATTTGTTATGATTTAAGATCCCGCTAACTGCAGAAATTTCTAAGAATGATAGAATTAATCTCTTTATTTTAAGTTAGAAGCTACTATTCTTATTCAGTTATTTGCTTTCATCACTGTACAAGTGTCCCTAGAAATAAGTTCTTGTTATCCAATATATAATAATCTTCAACTGCAAAATGCATTTAATTCAAAAACATTGATACCTTAACAGGTCTGTCGCCAACACAAAGCAATTCTAACAAGAAAGAGAGTAGAATCATAGCAACAACAGTGAGCCTTGTTGTCGGGACTTTATTGGTTGCCTGCATCATGTACTGCATATGCAGAAAGAAGAAAAGAATTAGAAAAGGTACATTCACACAGTGATCGGTTTTATATATCATATGATATCTCTATACGCTAGTGAATATCTGCAATTTCTTAAAATCATACGAGGGAAATTAATCTCTGTGATTCATTATAATGTGGATGGGAACATTAACATATGATATAGATCTATATAATGCAGAGAACTGGTATGAGGAAAGTAAAATGGAAGATGAAGATCTAGAGCTACCATTATATGATCTAGAGACCATGGTTGCTGCTACTGATAATTTTGCGGTTGCTAATAAACTTGGAGAAGGTGGATATGGTCCAGTGTACAAGGTAGGGTTACACATCCAATTACTTCAATTTAATGAAAGAACCCTTACTAGATCAATGTTCCATTTCCACAAGTACTGTTGGAACTCATTCATATTTTTAATTACATTCCTGTCTCTTTAGATATAGAATTGATATATAGTAGTTAGTTACTACATCAAAATTAGAATGCAATATAAAAAAACCATTCATCCAATGGATTTTCTTCATTTTTTATTCTTTTTTATTTTTCAGAAAGGAGCATGCCCATTTTTACTACTTTCGAATTTTTGCATCTCTTCAGTATACAAACTTTGCCAAAATTCATGTTAGATAATTCAGTAGCTTTTTCACATTCGAATAGCCTGGGAAATAATTAATCCCTTAATATGAAAATTAGTTATCCGCGTGTACAATTTAATGTATATTAGGGTATCATACAAGGGGACAAAGAAATTGCAATCAAGAGATTGTCTAAAGATTCCAACCAAGGAATTGATGAATTTAAAAACGAGGTTTTATTGATCGCAAAACTTCAACATAGAAATCTTGTCCGACTGTTGGGTTGTTGCACACAAGGGGAGGAGAGAATGCTAATATATGAATATATGCACAACAAAAGCTTGGATGCTTTTTTATTTGGTAATTCACTTATATTCCATCAATTAGAGAAACATACTTCATATTTTTTTTCTTCGGGATTATTATAACATATCATAACGCCAATGACAGATAAAGCAAGGGACGTAAGCTTGGATTGGCCAACACGCTATCATATTATTACAGGAATTGCACGAGGGCTTCTGTACCTTCATCAAGACTCTAGGTTTAGAATAATACATAGGGATTTAAAAACTAGCAATGTTCTTCTTGACAAAGATATGAATCCCAAAATTTCAGATTTTGGCCTAGCGAGAATTTTTGGTGGGGATGAAGCAACCACCAGGACAAGACGGGTGGTTGGCACATAGTAAGAATAAATTCCTTTTAACAGCAGGTTTGTACACAACTTTCACTTATTTCAATATTTGTTTTCATTTATTTATCTTAAAATATGCAGTGGTTATATGTCTCCTGAGTACGCAATGGATGGCATTTTCTCTATCAAATCTGATGTGTTTAGCTTCGGAGTTATAGTACTTGAAATTGTAAGCGGACAAAGAAGTAAAGGCGTGTTCCTTGCTGAACCAGAGTCTAATCTTTTAATGAAAGTAAGTTTTAGAATATAAACTCATAGCCTATTTAGTAACTTCTTTTAAGTAGTCAACAACTTATAAGTTGCTTATTTATATTGTATGGCAACAACTTACAAGTAGAAGGATAACAACTTACAAGTAGAAGGATTAAGTTGTTTAAAAGTTGATAGGTCACAATTAACAAACATTTGCTTATTGTTTATTTCATCTTTACAGTTGATTTGTGTTATAAAAAATTCAACTTTATCTATCCAAAGTTTCAAACATTCAACTTTTTACTATCACTTAAAAGTTAAAACTACTAAATTGTAAAACTAAAAAGTTATTTTAAGTGGGTATAAATAAAGTTGTTCCCAAATGGACTCAAACCATTGTTCATTGTAATTTGATTTACATGTTGCAGTTAGATAATGTTAGTTAATGTTCAAAATAGGAATCAGATTAAGGCTTTCAAAATAGGAATCAAATCATAAATTGCAAGGCTCAAACTTTAAATCAAAATGAGATTTAATTCTTAAGTCGTAGATTTAAAACTTCGATATTTTAAGGTTTGTACACAATTTAAAACTATAATGATGTCTGAACTTCTAAATCTAAACAAACTCAAATTTATCTTTTGTTCCATTTTTATTTTATTCGGAAAATATTAGAATTGGAATTGTGGATCCAAATAAGCATCTTGATCACATAAGTATGACTTGAATAATTTTTTTTTTTCAACTACGGTTTAAACTGAGTTTGAATTAAAATGCATATCGAATTGTAATGAGGGAGATCCGATCTGAAACAAGATTAAGTCGTAAAAGTTTAAGATTTTGGATAAAAATGTCAGGCATGGCGTTTATTGACTGAAGACAGAGGAAAAGAACTAATTGACCCATCCATGGGTCATGACTTCCCCTTGGATGAAATTATAAGATGTATAAAAGTAGGCGTGCTATGCGTACAAGAAAATCCTGAAGCCAGACCAACAATGTCATCAGTGGTGGTCATGTTGAGTGATCATCAAGATGCATCGGTTTGTCAGCCACAGGAACCGGGGTTTGCAGCAAGAAGAAATCTATCTTTTCCAAATTCTCCTTCAAGTAAACATGATATATTTACTGGTAATAGCATCTCCTTTTCAATGGAAGTGGGTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256468.1	4.6e-310	receptor-like serine/threonine-protein kinase SD1-8
Swissprot	O81832.4	3.4e-207	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
trEMBL	A0A5P1FCT7	3.6e-307	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	45.66	0.0	727	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC3G04823	AT4G21380.1	806	403	9	27	808	25	819	45.66	727
AfisC3G04823	AT4G27290.1	824	384	10	19	832	9	779	45.75	722
AfisC3G04823	AT1G65800.1	803	385	12	40	808	38	817	44.96	686

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	78	188	83.7	7.3e-24
PF00954.17	S_locus_glycop	Domain	218	326	97.8	4.5e-28
PF08276.8	PAN_2	Domain	348	416	69.7	1.5e-19
PF07714.14	Pkinase_Tyr	Domain	519	787	168.8	1.2e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005773	C	vacuole
GO:0004674	F	protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009875	P	pollen-pistil interaction
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0031625	F	ubiquitin protein ligase binding
GO:0032497	P	detection of lipopolysaccharide
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network