result

Gene information

Detail information of AfisC3G04861

Location

Gene	Chr	Start	End	Strand
AfisC3G04861	chr3	865050250	865052879	+

Sequences

CDS

>AfisC3G04861
ATGAGTCCACTGAAAAGTTTTATCCTCTTCCTCTTCTTCTGCATCTCCTACTCATTAAAAGACTCAATCACCGTTAACCAATCCATTACTGGATCCCAAAAGCTAACTTCCAAAGAAAGTAAATTTGAACTAAGGTTCTTCAAACCAGGTAAATCCCCATACTACTATCTCGGAATATTGTACAATCTAAACTTAATATCCCAAGAGACTACAGTTTGGGTTGCCAATAGAGAAACTCCCTTAACTGATATTTCCAAAACAAGCCTTGCAATCTCTGAAAATGGCAATTTAGTCCTTTCCAACCAAACTAACCCTCTTATTTGGTCCACTAACATCACTCATAACACTCATAAAGTAGTAGTTGTTCTTCTTGATAGTGGTAACTTAGTTTTAAGAGATGCATCAAATCCAAACGTGACTCTATGGCAAAGTTTGGACCATCCAACTCACACTTGGTTACCAGGCGGCAAGCTCGGCTTGAACAAAGTAACCAAAGAGTTGCAAAGATTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATCTTCAACCTTGAAATCGATCCAAACGGCACAAGTCAGTACTTCATACTCTGGAACAACACCTTCAACTACTGGAGCTCCGGCACCTGGGATGGTCATATTTTCAGTCTGGTCCCCGAAATGACTGCAAATTACATTTACGACTTCGATTACATTTCGAATGAAAAAGAGAATTATTTCACGTACACCGTGAAAAGCAACTACCCACTCACTTCCAGGTTCATTATGGACTTATCCGGTCAGATCAAGCAGTTGACCTGGGTGTCAAATAGCGGTTGGAGTCAGTTCTGGGCTCAACCCAAACGACAGTGTGACGTTCATGCTCTATGCGGTCCATTCGGTGTCTGCAATGAGGTCGGTTTGCCATTTTGTACATGTATCAACGGTTTCAGTGAAAATTCTCCATCGGATTGGGCTTTGAGCGATTGGGCTGCAGGCTGTTTTAGAAACACAAAATTAGAGTGTGAAAAAGATCGGTTCTATACAATGCCCAACACTAGAATGCCTGATAATCCTAAAAGTGTACAAGGTGAAAGTGCTTCTGATTGTGAATCTAACTGTTTGAAAGACTGTTCTTGTACTGCATACAGTTATAACTCTAGTGGTTGCTTTGTTTGGAATGGCGGTCTGCTTCATCTTCAAGATAGGTACAATGGTCCGAACGGTGGCACTCTGGTTGTTCGACTTGCCGCTTCTGAGCTTCCCATCAAAAATAAAAGCAAAATAGTTATAATCGCTTCCATAGTAGGTGGTAGTTTTGTCTTCCTAGTATTACTCATCATTGTATGGTTGGGATGTTGTTGTAGAAAGAGAAGTTCAGGTAAACAGAACACAGTAGAAGGGGGCTTGATTGCATTTCGATACAGCGAACTACAACGTGCTACTAGAAACTTCTCAGAGAAATTAGGAGGAGGAGGTTTTGGGTCGGTTTTCAAAGGAGTTTTACCCGACTCTTCATCAATAGCCGTGAAGCAACTAGAAGGAGCGAGACAAGGAGAAAAGCAATTCAGAACAGAGGTTAGCACGATAGGAACTATTCAACACGTGAATCTAGTTCGACTACATGGATTCTGCTCTGAAGGACTGCACAAGTTGTTGGTGTACGAGTACATGCCAAATGGTTCTCTAGACAACAAACTGTTCGACGAAGTAAGTTTAGATTGGAAAACAAGGTACCAGATAGCGCTTGGAACTGCAAGAGGTTTGAATTATCTGCATGAGCAATGCAGAGACTGCATCGTGCACTGCGATATAAAGCCTGAGAACATACTTCTAGATGCTTCTTTTGTGCCAAAAGTAGCAGATTTTGGATTAGCTAAACTTATAGGTCGAGATTTTAGTAGGGTACTGACGACAATGAGAGGGACGAGAGGGTATCTGGCTCCAGAATGGATATCGGGGGTCGCTATAACGGTGAAAGCTGATGTTTACAGTTATGGTATGATGCTTTTTGAGATTATTTCGGGTAAGAGGAATTCCGAGAATTTACAAGGGCAGAAAATTAAGTACTTTCCTTCACTGGCAGCAAGTAAAATGATGGAAGGGGAAGCAATGAGTTTGGTAGATAAGAGACTTGAAGGAAGTGAGGTTCTGGAAGAGGAAGTGATTAGAGCTTGCAAGGTTGCATGCTGGTGCATACAAGATGAAGAAGATTGTAGACCTTCGATGAGTCAGGTGATACAGATCTTGGAGGGCAATATGGAAGCTAGCATGCCCCCAATTCCTAGAGCGTTACAGATACTGTCTGAGAATCCTGAGAACATCGACTTCTTTTCTGAATTTTCTTCCAATGCTGCTAGTAGTAACTACACGAGTTCCAGGACTAAAAGCTCTACTACCAGTACCACGGATTGA

Protein

Gene

>AfisC3G04861
ATGCCCACTTTTAGCCAAAAAGCCTTCACTTTAAGCTCACTTGCATATTTAAATCTTCATCGTCCACAGTTAAAATCACGGCGTCTTCAAGCATGAGTCCACTGAAAAGTTTTATCCTCTTCCTCTTCTTCTGCATCTCCTACTCATTAAAAGACTCAATCACCGTTAACCAATCCATTACTGGATCCCAAAAGCTAACTTCCAAAGAAAGTAAATTTGAACTAAGGTTCTTCAAACCAGGTAAATCCCCATACTACTATCTCGGAATATTGTACAATCTAAACTTAATATCCCAAGAGACTACAGTTTGGGTTGCCAATAGAGAAACTCCCTTAACTGATATTTCCAAAACAAGCCTTGCAATCTCTGAAAATGGCAATTTAGTCCTTTCCAACCAAACTAACCCTCTTATTTGGTCCACTAACATCACTCATAACACTCATAAAGTAGTAGTTGTTCTTCTTGATAGTGGTAACTTAGTTTTAAGAGATGCATCAAATCCAAACGTGACTCTATGGCAAAGTTTGGACCATCCAACTCACACTTGGTTACCAGGCGGCAAGCTCGGCTTGAACAAAGTAACCAAAGAGTTGCAAAGATTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATCTTCAACCTTGAAATCGATCCAAACGGCACAAGTCAGTACTTCATACTCTGGAACAACACCTTCAACTACTGGAGCTCCGGCACCTGGGATGGTCATATTTTCAGTCTGGTCCCCGAAATGACTGCAAATTACATTTACGACTTCGATTACATTTCGAATGAAAAAGAGAATTATTTCACGTACACCGTGAAAAGCAACTACCCACTCACTTCCAGGTTCATTATGGACTTATCCGGTCAGATCAAGCAGTTGACCTGGGTGTCAAATAGCGGTTGGAGTCAGTTCTGGGCTCAACCCAAACGACAGTGTGACGTTCATGCTCTATGCGGTCCATTCGGTGTCTGCAATGAGGTCGGTTTGCCATTTTGTACATGTATCAACGGTTTCAGTGAAAATTCTCCATCGGATTGGGCTTTGAGCGATTGGGCTGCAGGCTGTTTTAGAAACACAAAATTAGAGTGTGAAAAAGATCGGTTCTATACAATGCCCAACACTAGAATGCCTGATAATCCTAAAAGTGTACAAGGTGAAAGTGCTTCTGATTGTGAATCTAACTGTTTGAAAGACTGTTCTTGTACTGCATACAGTTATAACTCTAGTGGTTGCTTTGTTTGGAATGGCGGTCTGCTTCATCTTCAAGATAGGTACAATGGTCCGAACGGTGGCACTCTGGTTGTTCGACTTGCCGCTTCTGAGCTTCCCATCAAAAATAAAAGCAAAATAGTTATAATCGCTTCCATAGTAGGTGGTAGTTTTGTCTTCCTAGTATTACTCATCATTGTATGGTTGGGATGTTGTTGTAGAAAGAGAAGTTCAGGTAAACAGAACACAGTAGAAGGGGGCTTGATTGCATTTCGATACAGCGAACTACAACGTGCTACTAGAAACTTCTCAGAGAAATTAGGAGGAGGAGGTTTTGGGTCGGTTTTCAAAGGAGTTTTACCCGACTCTTCATCAATAGCCGTGAAGCAACTAGAAGGAGCGAGACAAGGAGAAAAGCAATTCAGAACAGAGGTTAGCACGATAGGAACTATTCAACACGTGAATCTAGTTCGACTACATGGATTCTGCTCTGAAGGACTGCACAAGTTGTTGGTGTACGAGTACATGCCAAATGGTTCTCTAGACAACAAACTGTTCGACGAAGTAAGTTTAGATTGGAAAACAAGGTACCAGATAGCGCTTGGAACTGCAAGAGGTTTGAATTATCTGCATGAGCAATGCAGAGACTGCATCGTGCACTGCGATATAAAGCCTGAGAACATACTTCTAGATGCTTCTTTTGTGCCAAAAGTAGCAGATTTTGGATTAGCTAAACTTATAGGTCGAGATTTTAGTAGGGTACTGACGACAATGAGAGGGACGAGAGGGTATCTGGCTCCAGAATGGATATCGGGGGTCGCTATAACGGTGAAAGCTGATGTTTACAGTTATGGTATGATGCTTTTTGAGATTATTTCGGGTAAGAGGAATTCCGAGAATTTACAAGGGCAGAAAATTAAGTACTTTCCTTCACTGGCAGCAAGTAAAATGATGGAAGGGGAAGCAATGAGTTTGGTAGATAAGAGACTTGAAGGAAGTGAGGTTCTGGAAGAGGAAGTGATTAGAGCTTGCAAGGTTGCATGCTGGTGCATACAAGATGAAGAAGATTGTAGACCTTCGATGAGTCAGGTGATACAGATCTTGGAGGGCAATATGGAAGCTAGCATGCCCCCAATTCCTAGAGCGTTACAGATACTGTCTGAGAATCCTGAGAACATCGACTTCTTTTCTGAATTTTCTTCCAATGCTGCTAGTAGTAACTACACGAGTTCCAGGACTAAAAGCTCTACTACCAGTACCACGGATTGATGATCTATGACCGGAAATGGTTTGAACTTATGTATGTATGTGTGACTAAAATATACACAATATGGTTTGACCGCAAATGGTTTGAACTTAAGTAGTAACTACAATATTGATGTATGTAGTTGCTTATATAGCATGTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	0.0e+00	uncharacterized protein LOC109834727
Swissprot	O64477.1	2.1e-222	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	5.3e-271	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	53.94	0.0	815		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04861	AT2G19130.1	799	332	18	4	775	7	796	53.94	0.0	815
AfisC3G04861	AT4G00340.1	766	397	21	29	763	27	777	42.17	4e-150	528
AfisC3G04861	AT4G21380.1	784	432	19	28	759	39	812	36.99	7e-134	475

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	70	175	118.1	1.4e-34
PF00954.17	S_locus_glycop	Domain	207	315	101.9	2.5e-29
PF08276.8	PAN_2	Domain	337	393	60.8	8.7e-17
PF00069.22	Pkinase	Domain	481	743	169.7	7.2e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0007154	P	cell communication
GO:0051707	P	response to other organism
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0051704	P	multi-organism process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network