result

Gene information

Detail information of AfisC3G04880

Location

Gene	Chr	Start	End	Strand
AfisC3G04880	chr3	868521268	868523820	+

Sequences

CDS

>AfisC3G04880
ATGGCGTTTTCAAGTATGAGTACACCAAAAAGTTTTCTCCTCTTCCTCTTTTTCAACACCTCCTACGCATTGAACCATAGAATCACCCTTAGTGAGTCCATAACTGGATCAGAAAAGCTCACTTCCAAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTTCATACTACTATCTCGGAATATGGTTCAGTCTTAACCTCATACCTCAACAAACTGTAGTCTGGGTTGCCAATAGAGAAACTCCCTTAACTGATATTTCCAAAACAAGGTTTGCAATCTCTGGAAATGGCAATTTAGTGCTTTCCAACCAAACTAACCCTCTTATTTGGTCCACTAACACCACTCATAACGCTCACAAAGTAGTAGCTGTGCTTCTTGATAGTGGTAACTTAGTTTTAAGTGATGCATCACATCCAAACGTAACTCTTTGGCAAAGCATTGACCATCCAACTCACACTTGGTTACCAGGCGGAAAGCTCGGACTAAACAAAGTAACCAAAGAAGTGAAAAGGTTAACTTCCTGGAAAAGTAAAGACGATCCTGCCCCTGGAAGTTTCAGTTATGGACCCGATCCGAATGGTACAGATCAATACTTCATGCTCTGGAACAACTCCATCGAATACTGGACCAGCGGCACCTGGTCCAGTGTTTTCAGTATTTTTAGTAAGATCCCTGAAATGTATGATCGATCCATTTGCCCATTCACTTATATTTCCAATGACAGGGAAAATTATTCCACGTACACCATTGAAAGCAAATTCCCATTCTTGTCTATGTTGGTAATGGAGCTATCTGGCCAGCTCAAGCAGGTTAATTGGGTGACCAACAGTTGGAACGCGGTCTGGGTTCAACCCCAAAAACAATGCGACGTTCATGCGTTATGTGGTCCGTTCGGTGTCTGCAATGAGGGTGGTTTGCCATTTTGTAATTGCACCAGGGGATTTAGCGAAAATTCTCCATCAGATTGGGCTTTGAGCGATTGGACAGGAGGTTGTGTTAGAAATACAAAACTGCAGTGTGAAAACAGAGGAAAGGGTGAAAAAGATCGGTTCTTTATGATGCCCAACACTAGAATGCCTGCTAATCCTCGAACTGTACAAGCTGGAAGTGCTTCTGATTGCGAGTCTAACTGCTTGAATAACTGTTCGTGCAATGCTTATGCTTATAACCCTAGCGGTTGCTTTGTTTGGCATGGCGCTTTGCTTAATCTTCAAGACAGGTATGATGGTCCTAACGGAGACGATCTCTTTGTTCGCCTCGCCGCCTCCGAACTTCCTATTATACATAATAGCAAAATAGTTATCATCATTTTTGTAGTAGGCGGTGTTTTCTGTTTCTTAGTATTACTCGTTGTTGCATGGTTGGTATGTTTTCGGGGAAAAAGAACTTTACTAAGGCCAAACGTTGTAGAAGGTGGTTTGATTGCATTTCGATACAATGAACTGCAACGGGCGACAAGGAATTTCTCAGAAAAGCTAGGAGGAGGAGGTTTCGGGTCGGTTTTCAAAGGAGTTCTACCCGACTCATCATTAATAGCCGTTAAGCAACTAGAAGGAGTTAGACAAGGGGAAAAGCAATTTAGAACTGAGGTGGGCACAATAGGAATAATACAACATGTGAATTTGGTTCGACTTCGTGGATTTTGCTCTCAAGGTCTGCACAAATTGTTAGTGTATGAGTACATGCCCAATGGTTCTTTGGATAGCAAACTATTTAATGAAGATAAAAGTTTAGATTGGAAAACAAGGTACCAAATAGCATTAGGAACAGCACGAGGATTGACTTACCTACATGAGAAATGCAAAGACTGCATTGTGCATTGTGATATAAAGCCTGAAAACATACTTCTTGATGCTTCATTTGTGCCGAAATTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGGGATTTTAGTAGGGTATTGACTTCGATGAGGGGAACAATAGGGTACCTTGCTCCAGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCTGATGTGTACAGCTATGGAATGATGCTTTTTGATATAATTTCAGGCAAGAAGAATTTAAAGAAACTACAAGGACATAAGATATGCTACTTTCCTTCACTGGCGGTAAGTAAAATGAAGGAAGGGGATGTGATGAGTTTGATAGATGAGAAACTAGAAGGAGGAGAGATTCCAGAAGAGGAAATTATTAAGGTTTGTAAAGTTGCGTGTTGGTGCATACAGGATGAAGAAAATTGTAGACCTTCGATGAGTCAAGTGGTTCAAATGTTGGAGGGTGTTATAGAAGTTAGCGTGCCACCCATTCCGAGAATGTTGCAGATGCTTGCAGAGAATCCAGACGACACTGATTTATTTTCCAAGCTTTTTTTGAATGATGCTAATAGAACTAGGTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	0.0e+00	uncharacterized protein LOC109834727
Swissprot	O64477.1	7.4e-220	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A5P1F913	1.0e-266	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	51.30	0.0	779		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04880	AT2G19130.1	805	360	15	5	788	3	796	51.30	0.0	779
AfisC3G04880	AT4G00340.1	780	397	23	34	777	27	778	40.90	9e-143	504
AfisC3G04880	AT4G21380.1	801	433	23	28	771	32	811	36.20	2e-127	453

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	181	120.3	3e-35
PF00954.17	S_locus_glycop	Domain	212	321	80.5	1.1e-22
PF08276.8	PAN_2	Domain	348	406	59.4	2.3e-16
PF00069.22	Pkinase	Domain	493	756	160.9	3.5e-47

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0007154	P	cell communication
GO:0051707	P	response to other organism
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0051704	P	multi-organism process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network