result

Gene information

Detail information of AfisC3G04884

Location

Gene	Chr	Start	End	Strand
AfisC3G04884	chr3	868904590	868907262	+

Sequences

CDS

>AfisC3G04884
ATGGCGTTTTCAAACATGAACCCACTGAAAACTTTTCTCCTCGTCTTCTTCTTCAGCATCTCCTATGCATTGAACGATAGAATTACCCTTACTCGGTTCATTACTGGGTCAGAAAAGCTCACTTCCGAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTCCATACCATTATCTCGGAATATGGTACAATCTCAACCTCATATCTCAACAAACTTCAGTTTGGGTTGCCAACAGAGAAGCTCCCTTAACTGATATTTCCAAAACAAAACTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCATAACACTCATAAATCAGTAGCCGTTCTTCTTGATGCTGGTAATCTTGTACTAAGAGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCAACTGACACGTTATTACCAGGCGGCAAGTTTGGACTAAACAAAGTTACCAAAGATTTGCAAAGATTAACTTCCTGGAAAAATGAAGACGATCCAGCCCCTGGAATTTTCAGTTTTGAAGCCGATCCGAACGGTTCTAATGAATTCTGCATGCTCTGGAACAACTCCGTCAAATACTGGGCCAGCGGCACCTGGAATGGTCGTTTTTTCAGTGATATCCCTGAAATGTCTGAACATAATGTCGAATCCACTTATATTTCCAATGACAGAGAAAATTACTACACGTACACGATGAACAATGACTTCCCACTCATGGTTAGGTTAATAATGGACTTATCTGGCCAGAGCACGCACTTCATTTGGATGCCCAACAGCAGCAATTGGAACCCATTTTGTGCTCAACCCAAACAACAATGCGACGCTTATGCTTTATGCGGTCCGTTCGGTGTCTGCAACGAGGTTGGTTTGCCATTTTGTACATGTATCAAGGGTTTCAGTGAAAATTCTCCATCGGATTGGGCTTTGAGCGACTGGACAGGAGGCTGTGTTAGAAATACAAAACTGGAGTGCGAAGGCAGTGAAAAAGGTGAAAAAGATCGGTTCTTTATGATGCCCAACACTAGAATGCCTGCTAATCCTCGAAGTGTACAAGCTGAAAGTGCTTCTAATTCTGATTGTGAGTCCAATTGTTTGGATAATTGTTCGTGTACTGCTTACACTTATAACTCTAGCGGTTGCTTTGTTTGGCATAGCTCTTTGCTTAATCTACAAGATAGGTACAATGGTCCTAACGGAGGCACTCTCTTTGTTCGTCTTGCCGCCTCCGAACTTCCTATTATACATAATAGCAAAATAGTTATAATCATTTCTGCAGTAGGCGGTATTTTTAGTTTCTTAGTATTACTCGTTGTTGCATGGTTGGTATGTTGTTGGGGAAAAAGAACTTTACGTAGGTCAAACATTGTAGAAGGTGGCTTGATTGTATTTCGATACAATGAACTGCAACGGGCGACTAGGAATTTCTCAGAAAAGCTAGGTGGAGGAGGTTTCGGGTCGGTTTTCAAAGGAGTTCTACCTGACTCATCATTAATAGCCGTTAAGCAACTAGAAGGAGTTAGACAAGGGGAAAAGCAATTCAGAGCGGAGGTGAGCACAGTAGGAACAATCCAACATGTGAATTTGGTTCGACTTCGTGGATTCTGCTCTCAAGGCCTGCACAAATTGTTAGCATATGAGTACATGACCAATGGTTCTTTGGATAGCAAGCTATTTAATGAAGATAATTGTTTAGATTGGAAAACAAGGTACCAGATTGCAGTAGGAACGGCACGAGGATTGACTTATCTACACGAGAAATGCAAAGATTGCATTGTGCATTGTGATATAAAGCCCGAAAATGTGCTTCTTGATGCTTCATTTGTGCCAAAAGTAGCAGATTTTGGGATGGCAAAATTAATAGGAAGGGATTTTAGTCGGGTATTGACTACGATGAGAGGGACCATAGGTTACCTTGCTCCAGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCAGATGTGTATAGCTATGGAATGATGCTTTTTGAGATAATTTCAGGTAAGAGGAATTTTAAAAAACTGCAAGGACAGAAAATAAGCTATTTTCCTTCACTGGTGGTGAGTAAAATGAAGGAAGGGGATGTGATGAGTTTGGTAGACGAGAAACTAGAAAGAGGAGAAATTTTAGAAGAGGAAGTTAGTAAGGTTTGTAAAGTTGCATGTTGGTGCATACAGGATAAAGAAGATTGTAGACCATTGATGAGTCAAGTGGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGTGTGCCACCCATTCCGAGAATTTTGCAAATACTTGCAGAAAATTCAGAAGACACTGATTTATTTTCCGAGCTTTTTTGGAATGATACTAGTAGCAACTACATGACTGCGTGGATCAAAAGCTTTTCTACTAGTTCCATGTATTGA

Protein

Gene

>AfisC3G04884
CTATTAGCCTCGTGCCAACCTACTTTGAGAATAAAATAACCATGAAGTCAACAATATTAATGTTGTCCACAAAAGTCTGCAGTCATAAATCTTAGTAACGCTTAACCAACTGATTTTACGACTACACATGGATTTGCTGCATGTATTTATCAGAATGAGGTGGCGATTTGAGATTATATATAAAAGATAATCACACTTTCATCTCTAAATCCTCATCCTCAATTTATATTCATGGCGTTTTCAAACATGAACCCACTGAAAACTTTTCTCCTCGTCTTCTTCTTCAGCATCTCCTATGCATTGAACGATAGAATTACCCTTACTCGGTTCATTACTGGGTCAGAAAAGCTCACTTCCGAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTCCATACCATTATCTCGGAATATGGTACAATCTCAACCTCATATCTCAACAAACTTCAGTTTGGGTTGCCAACAGAGAAGCTCCCTTAACTGATATTTCCAAAACAAAACTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCATAACACTCATAAATCAGTAGCCGTTCTTCTTGATGCTGGTAATCTTGTACTAAGAGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCAACTGACACGTTATTACCAGGCGGCAAGTTTGGACTAAACAAAGTTACCAAAGATTTGCAAAGATTAACTTCCTGGAAAAATGAAGACGATCCAGCCCCTGGAATTTTCAGTTTTGAAGCCGATCCGAACGGTTCTAATGAATTCTGCATGCTCTGGAACAACTCCGTCAAATACTGGGCCAGCGGCACCTGGAATGGTCGTTTTTTCAGTGATATCCCTGAAATGTCTGAACATAATGTCGAATCCACTTATATTTCCAATGACAGAGAAAATTACTACACGTACACGATGAACAATGACTTCCCACTCATGGTTAGGTTAATAATGGACTTATCTGGCCAGAGCACGCACTTCATTTGGATGCCCAACAGCAGCAATTGGAACCCATTTTGTGCTCAACCCAAACAACAATGCGACGCTTATGCTTTATGCGGTCCGTTCGGTGTCTGCAACGAGGTTGGTTTGCCATTTTGTACATGTATCAAGGGTTTCAGTGAAAATTCTCCATCGGATTGGGCTTTGAGCGACTGGACAGGAGGCTGTGTTAGAAATACAAAACTGGAGTGCGAAGGCAGTGAAAAAGGTGAAAAAGATCGGTTCTTTATGATGCCCAACACTAGAATGCCTGCTAATCCTCGAAGTGTACAAGCTGAAAGTGCTTCTAATTCTGATTGTGAGTCCAATTGTTTGGATAATTGTTCGTGTACTGCTTACACTTATAACTCTAGCGGTTGCTTTGTTTGGCATAGCTCTTTGCTTAATCTACAAGATAGGTACAATGGTCCTAACGGAGGCACTCTCTTTGTTCGTCTTGCCGCCTCCGAACTTCCTATTATACATAATAGCAAAATAGTTATAATCATTTCTGCAGTAGGCGGTATTTTTAGTTTCTTAGTATTACTCGTTGTTGCATGGTTGGTATGTTGTTGGGGAAAAAGAACTTTACGTAGGTCAAACATTGTAGAAGGTGGCTTGATTGTATTTCGATACAATGAACTGCAACGGGCGACTAGGAATTTCTCAGAAAAGCTAGGTGGAGGAGGTTTCGGGTCGGTTTTCAAAGGAGTTCTACCTGACTCATCATTAATAGCCGTTAAGCAACTAGAAGGAGTTAGACAAGGGGAAAAGCAATTCAGAGCGGAGGTGAGCACAGTAGGAACAATCCAACATGTGAATTTGGTTCGACTTCGTGGATTCTGCTCTCAAGGCCTGCACAAATTGTTAGCATATGAGTACATGACCAATGGTTCTTTGGATAGCAAGCTATTTAATGAAGATAATTGTTTAGATTGGAAAACAAGGTACCAGATTGCAGTAGGAACGGCACGAGGATTGACTTATCTACACGAGAAATGCAAAGATTGCATTGTGCATTGTGATATAAAGCCCGAAAATGTGCTTCTTGATGCTTCATTTGTGCCAAAAGTAGCAGATTTTGGGATGGCAAAATTAATAGGAAGGGATTTTAGTCGGGTATTGACTACGATGAGAGGGACCATAGGTTACCTTGCTCCAGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCAGATGTGTATAGCTATGGAATGATGCTTTTTGAGATAATTTCAGGTAAGAGGAATTTTAAAAAACTGCAAGGACAGAAAATAAGCTATTTTCCTTCACTGGTGGTGAGTAAAATGAAGGAAGGGGATGTGATGAGTTTGGTAGACGAGAAACTAGAAAGAGGAGAAATTTTAGAAGAGGAAGTTAGTAAGGTTTGTAAAGTTGCATGTTGGTGCATACAGGATAAAGAAGATTGTAGACCATTGATGAGTCAAGTGGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGTGTGCCACCCATTCCGAGAATTTTGCAAATACTTGCAGAAAATTCAGAAGACACTGATTTATTTTCCGAGCTTTTTTGGAATGATACTAGTAGCAACTACATGACTGCGTGGATCAAAAGCTTTTCTACTAGTTCCATGTATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	3.9e-304	uncharacterized protein LOC109834727
Swissprot	O64477.1	1.1e-213	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	1.5e-265	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	50.75	0.0	763		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04884	AT2G19130.1	804	359	18	9	789	7	796	50.75	0.0	763
AfisC3G04884	AT4G00340.1	786	392	23	33	778	26	778	40.84	1e-145	514
AfisC3G04884	AT4G21380.1	788	423	19	34	768	40	808	37.18	3e-133	473

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	180	121.5	1.3e-35
PF00954.17	S_locus_glycop	Domain	212	320	100.7	5.9e-29
PF08276.8	PAN_2	Domain	347	407	58.2	5.5e-16
PF00069.22	Pkinase	Domain	494	757	161.5	2.2e-47

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0051707	P	response to other organism
GO:0009875	P	pollen-pistil interaction
GO:0044699	P	single-organism process
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network