result

Gene information

Detail information of AfisC3G04887

Location

Gene	Chr	Start	End	Strand
AfisC3G04887	chr3	869324859	869325901	-

Sequences

CDS

Protein

Gene

>AfisC3G04887
ATGGTAGGCACTGGATTCAACCCCAAAAACAATGCGACGTTTATGCTTTATGTGGTCCGTTCGGCGTCTGCAACGAGGTTGGTTTACCATTTTGTAATTGTATTAGGGGGTTTAGTGAAAATTCCCCATCAGATCGGGCTTTGAGTGACTGGACAGAAGGCTGTGTTAGAGATACAAAACTGGAGTGTGGAAGCAGTGGAAAGGGTGAAAAAGATCGGTTTTTTATGATGCCCAACACTAGAATGCCAGCTAATCCTCGAAGCGTACAAGCTGAAAGTGCTTCTGATCTTGATTGTGAGTCTAATTGTTTGAATAACTGTTTATGTACTGCTTACACTTATAACTCTAGCGGTTGCTTTGTTTGGCATGGCCCTTTACTTAATCTTCAAGATAGATACAATGGTCCTAACGGAGGCATTCTCTTTGTTCGCCTTGCCGCCTCCGAACTTCCTATTATACATAATAGCAAAATAGTTATAATCATTTCTGTAGTAGGCGGTGTTTTCAGCTTCTTAATATTACTCGTTGTTGCATAGTTGGTATGTTGTTGGGGAAAAAGAACTCTACGTAGATCAAAGGTTGTAGAAGGTGGTTTGATTGCATTTCGATACAGTGAACTGCAACAGAGGGCTAGGAATTTCTCAGAAAAGCTTGGAGGAGGAGGTTTCGGGTTTGTCTTCAAAGGAGTTCTATCCAACTCATCATCTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGATCAGCTACACAAGGAGAAAAGCAATTCAGAACGGAGGTGCGCACAATAGGAACAATACAACATGTGAATTTGGTTCGACTTCGTGGATTTTGTTCTCAAGGTCTGCACAAATTATTGGTGTATGAGTACATGCCCAATGGTTCTTTGGATAGCAAACTATTTAAAGAAGATAACAGTTTAGATTGGAAAACAAGGTACCAGATAGCAATAGGAACGGCACGAGGATTGACTTATCTACATGAGAAATGCAGAGATTGCATTGTGCATTGTGATATAAAGCCAAAGAAGAGAACGTACTTCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	2.8e-79	uncharacterized protein LOC109834727
Swissprot	O64477.1	5.3e-59	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A7N2MAB0	2.0e-74	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	44.79	2e-61	232		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04887	AT2G19130.1	317	111	8	26	285	314	623	44.79	2e-61	232
AfisC3G04887	AT1G34300.1	149	52	3	140	286	469	613	61.07	2e-48	189
AfisC3G04887	AT4G00340.1	145	54	3	142	285	469	610	60.00	8e-45	177

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	157	282	82.4	2.8e-23

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0004674	F	protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007154	P	cell communication
GO:0031625	F	ubiquitin protein ligase binding
GO:0032501	P	multicellular organismal process
GO:0044699	P	single-organism process
GO:0046777	P	protein autophosphorylation
GO:0050896	P	response to stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network