result

Gene information

Detail information of AfisC3G04892

Location

Gene	Chr	Start	End	Strand
AfisC3G04892	chr3	869898313	869899386	-

Sequences

CDS

>AfisC3G04892
ATGGCGTTTTCAAGCATGAATCCACTGAAAACTCTCCTCCTCCTCCTCCTCCTCTTCAACGTCTCCTGCTATGCATTAAAAGACAGAATCACCCTTAATCAGTCCATTACTGGATCAGAAAAACTCGCTTCCAAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTTCATACTACTATCTCGGAATATGGTTCAGTCTTAACCTCATACCTCAACAAACTGTAGTCTGGGTTGCCAATAGAGAAACTCCCTTAACTGAAATATCCAAAACAACCCTTGCAATCTATGAAAATGGCAATATAGTCCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACACCACTCGTAGTCGTAATACTCATAAAGTAGAAGCCGTTCTTCTTGATACCGGTAACCTTGTACTAAGGGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCTACTCACACTTGGCTATCAGGAGGCAAGCTCGGAATTAACAAAGTCACTAATGAGTTGCAAAGATTAACCTCATGGAAAAATGAAGACGATCCTGCCCCTGGAATCTTCAACCTTGAAATTGACCGAAATGGCACTAGTCAGTACTTCGTACTCTGGAACCATTCCTACAGCTTTTGGAGCAGTGGTACCTGGACCCGTGATCGTATTTTCAGCCTGGTCCCTGAAATGACTGCAAGTTATAACCCCTTCAACATTGATTACATCTCCAATGAAAAGGAAAATTACTTCACTTACGTAGAGAGAAGCGACTGCCCACTCACGTTCAGGTTCATAATGGACTTATCTGGCCAGATCAAGATGTTGACTTGGTTGAACAACAGTGGTTGGAGTCTGTTATGGGCACAACCCAAACTACAATGCGACGTTCATGCTTTATGCGGTCCATTCGGTGTCTGCAATGAGGTTGGTTTGCCATTTTGTAATTGTATCAGGGGGTTTAGCATAAACTCTCCATCGGATTGGGCCTTGAGTGATTGGTCCAAAGGCTGTGTTAGAGATACGAAACTGGAGTGTGAAAGCAATGGAGAGGGTGAAAAAGATTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	3.4e-127	uncharacterized protein LOC109834727
Swissprot	O64477.1	8.2e-78	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5YQ48	4.5e-105	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	42.98	8e-76	280		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04892	AT2G19130.1	342	178	11	14	348	10	341	42.98	8e-76	280
AfisC3G04892	AT4G27290.1	349	202	10	12	355	9	346	37.54	3e-57	219
AfisC3G04892	AT4G21380.1	324	175	11	35	354	39	352	41.67	2e-56	216

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	76	184	119.4	6e-35
PF00954.17	S_locus_glycop	Domain	216	325	89.4	1.9e-25

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005773	C	vacuole
GO:0004674	F	protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0007154	P	cell communication
GO:0009506	C	plasmodesma
GO:0031625	F	ubiquitin protein ligase binding
GO:0032497	P	detection of lipopolysaccharide
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network