result

Gene information

Detail information of AfisC3G04893

Location

Gene	Chr	Start	End	Strand
AfisC3G04893	chr3	870023027	870025704	+

Sequences

CDS

>AfisC3G04893
ATGGCGTTTTCAAGTACAAGTCGACAGAAAAGTTTTCTCCTCTTTCTCTATTTCAACATCTCCTACGCATTAAACGATGGAATTACTCTTACTGAATCCATTACTGGCTCCGAAAAGCTCGCATCCAAAGGAGGCAAATTTGAACTAGGATTTTTCCAACCAGGCAAATCTCGCTACTACTATCTTGGAATATGGTACAATCTTAACCTCATACCTCAACAAACTTCAGTTTGGGTTGCCAACAGAGAAATTCCCTTAACTGATATTTCTAAAACAAAATTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCATAATACTCATAAAGTAGTAGCTGTTCTTCTTGATAGTGGTAACTTAGTTTTAAGAGATGCATCAAATCCAGACGTAGCTCTGTGGCAAAGCTTCGACCATCCAACTCACACTTATTTACCAGGCAGCAAGCTCGGACTAAACAAAGTAACCAAAGAGGTGCATAGATTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATCTTCCACCTTGAAATCGATCCAAACAGCACAAGTCAGTACTTCATACTCTGGAACAAGACCTTCAACTACTGGAGCTCCGGCACCTGGGATGGTCATATTTTCAGTTCGGTCCCCGATGTGACCCAAAATGGCATTTACCTCGCCCATTACATTTCAAATGACAAAGAGAGTTACTTCACATACACCGTGAACAGCGACCACCCAATCACTTCTAGGATGATTATGGACTTATCCGGTCAGATCAAGCACTTGACTTGGGTGGCAAATAGCGGCTGGTGTCAGTTCTGGTCTCAACCCCAACAGCAGTGTGATGTTCATGCTTTATGTGGTCCATTTGGTGTCTGCAACGAGCTTGCTATGCCATTTTGTAGATGTATCAAGGGTTTCACTGAAAACACTCGATCGGACTGGGCTTTGAGCAACTGGGCTGGAGGCTGCGTCAGAAATACAAAATTGGAGTGTGAAAAGGATCGATTCTTTACCATGCCCAACACTAGAATGCCTGATAATCCTAAAAGTGTACAAGGTAGAAGTGCTTCTGGTTGCGAGTCCAACTGTTTGAAAGACTGTTCTTGTACTGCATACAGTTATAACTCTAGAGGTTGCTTTGTTTGGCATGGCGATCTTCTTCATCTTCAAGATCAGTACAATGGCCCGAATGGGGGGACTTTGTTTGTTCGTCTTGCGGCTTCTGAACTTCCTATTGTGAATAAAAACAAATTGGCTATGATAGCTTATAATGTAGTAAGTGCTATCATAGGCATTCTAGTGTTATTTATGGTTGCATGGTTGGTATGTTATTATAAAGGGAAAAAGGCATATAAACAGAAGGCTGTGGTAGGAGTTTTGAGTGCATTTCGATACAGTGAACTGCAACGAGCAACTAAAAACTTCTCAGAAAAATTAGGAGGAGGAAGTTTCGGGTCGGTCTTCAAAGGAGTTCTGCCCAACTCAACATCAAGTGATATGATTGCAGTGAAACGGTTGGAAGGAGTTAGACAAGGTGAAAAGCAGTTCAGAACGGAGGTGAGCACAATAGGAAGAATACAACATGTGAATCTAGTTCGACTTCATGGATTTTGTTCTGAAGGACTGCACAAATTGTTAGTGTATGAGTACATGTCCAATGGCTCTTTGGACAACAAACTGTTTAATGAAGATAGTAGTTTAGATTGGAAAACAAGGTACCAGATAATGTTAGGAATAGCACGAGGACTGACTTATCTGCATGAGGAGTGTATAGATTGCATTGTGCACTGTGATATAAAGCCTGAGAACATACTTCTAGATGCTTCCTTTGTGCCTAAAGTGGCGGATTTTGGAATGGCAAAATTAATAGGAAGAGATTTTAGTAGGGTATTGACTACGATGAGAGGAACAATAGGTTATCTTGCTCCGGAATGGATATCGGGAGGAGCAATAACAGCAAAGGCTGATGTGTACAGCTATGGAATGATGCTTTTTGAGATCATTTCAAGTAAAAGGAATTTAAAAAAACTACAAGGACAGAAAATCAGCTATTTTCCTTCACTGGCCGTGAGTAAGATGAAGGAAGGGGATGTGATGAGTTTAGTAGATGAGAAACTAAAAGGAGGAGATATTTTAGAAGAGGAAGTTATTAGAGTTTGTAAAATTGCATGTTGGTGCATACAGGAAGAAGAAGACGATAGACCCTCGATGAGTCAAGTTGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCATGCCACCCATTCCAAGAATGTTGCAGATACTTATGGAATATCTAGAAGACACTGATTTATTTTATGAGCTTTTTTGGAATGATGCTAATAGTAACTAG

Protein

Gene

>AfisC3G04893
CTCACATTTACATCTAAACCTTCATCCTTCTCAATCTATATTCATGGCGTTTTCAAGTACAAGTCGACAGAAAAGTTTTCTCCTCTTTCTCTATTTCAACATCTCCTACGCATTAAACGATGGAATTACTCTTACTGAATCCATTACTGGCTCCGAAAAGCTCGCATCCAAAGGAGGCAAATTTGAACTAGGATTTTTCCAACCAGGCAAATCTCGCTACTACTATCTTGGAATATGGTACAATCTTAACCTCATACCTCAACAAACTTCAGTTTGGGTTGCCAACAGAGAAATTCCCTTAACTGATATTTCTAAAACAAAATTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCATAATACTCATAAAGTAGTAGCTGTTCTTCTTGATAGTGGTAACTTAGTTTTAAGAGATGCATCAAATCCAGACGTAGCTCTGTGGCAAAGCTTCGACCATCCAACTCACACTTATTTACCAGGCAGCAAGCTCGGACTAAACAAAGTAACCAAAGAGGTGCATAGATTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATCTTCCACCTTGAAATCGATCCAAACAGCACAAGTCAGTACTTCATACTCTGGAACAAGACCTTCAACTACTGGAGCTCCGGCACCTGGGATGGTCATATTTTCAGTTCGGTCCCCGATGTGACCCAAAATGGCATTTACCTCGCCCATTACATTTCAAATGACAAAGAGAGTTACTTCACATACACCGTGAACAGCGACCACCCAATCACTTCTAGGATGATTATGGACTTATCCGGTCAGATCAAGCACTTGACTTGGGTGGCAAATAGCGGCTGGTGTCAGTTCTGGTCTCAACCCCAACAGCAGTGTGATGTTCATGCTTTATGTGGTCCATTTGGTGTCTGCAACGAGCTTGCTATGCCATTTTGTAGATGTATCAAGGGTTTCACTGAAAACACTCGATCGGACTGGGCTTTGAGCAACTGGGCTGGAGGCTGCGTCAGAAATACAAAATTGGAGTGTGAAAAGGATCGATTCTTTACCATGCCCAACACTAGAATGCCTGATAATCCTAAAAGTGTACAAGGTAGAAGTGCTTCTGGTTGCGAGTCCAACTGTTTGAAAGACTGTTCTTGTACTGCATACAGTTATAACTCTAGAGGTTGCTTTGTTTGGCATGGCGATCTTCTTCATCTTCAAGATCAGTACAATGGCCCGAATGGGGGGACTTTGTTTGTTCGTCTTGCGGCTTCTGAACTTCCTATTGTGAATAAAAACAAATTGGCTATGATAGCTTATAATGTAGTAAGTGCTATCATAGGCATTCTAGTGTTATTTATGGTTGCATGGTTGGTATGTTATTATAAAGGGAAAAAGGCATATAAACAGAAGGCTGTGGTAGGAGTTTTGAGTGCATTTCGATACAGTGAACTGCAACGAGCAACTAAAAACTTCTCAGAAAAATTAGGAGGAGGAAGTTTCGGGTCGGTCTTCAAAGGAGTTCTGCCCAACTCAACATCAAGTGATATGATTGCAGTGAAACGGTTGGAAGGAGTTAGACAAGGTGAAAAGCAGTTCAGAACGGAGGTGAGCACAATAGGAAGAATACAACATGTGAATCTAGTTCGACTTCATGGATTTTGTTCTGAAGGACTGCACAAATTGTTAGTGTATGAGTACATGTCCAATGGCTCTTTGGACAACAAACTGTTTAATGAAGATAGTAGTTTAGATTGGAAAACAAGGTACCAGATAATGTTAGGAATAGCACGAGGACTGACTTATCTGCATGAGGAGTGTATAGATTGCATTGTGCACTGTGATATAAAGCCTGAGAACATACTTCTAGATGCTTCCTTTGTGCCTAAAGTGGCGGATTTTGGAATGGCAAAATTAATAGGAAGAGATTTTAGTAGGGTATTGACTACGATGAGAGGAACAATAGGTTATCTTGCTCCGGAATGGATATCGGGAGGAGCAATAACAGCAAAGGCTGATGTGTACAGCTATGGAATGATGCTTTTTGAGATCATTTCAAGTAAAAGGAATTTAAAAAAACTACAAGGACAGAAAATCAGCTATTTTCCTTCACTGGCCGTGAGTAAGATGAAGGAAGGGGATGTGATGAGTTTAGTAGATGAGAAACTAAAAGGAGGAGATATTTTAGAAGAGGAAGTTATTAGAGTTTGTAAAATTGCATGTTGGTGCATACAGGAAGAAGAAGACGATAGACCCTCGATGAGTCAAGTTGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCATGCCACCCATTCCAAGAATGTTGCAGATACTTATGGAATATCTAGAAGACACTGATTTATTTTATGAGCTTTTTTGGAATGATGCTAATAGTAACTAGGTCACTGGGAGGATCAAAAGCTTTTCTAATAGTTCCATGTATTGATATCTAAGATAGATTTGCCTAAGTATGTGTGACAAAGGTGCTCAAAATATGTATTTTGATTGTTGTTTCTATGCTTAATATTAATGTATGCAATTGCTTGTGTATGGTATGTGTTAATTTAGTACAGAGTCTGATATTCATTATTCTCCTTTTTGGAAGATCCCCACCGAGAGCATGTTTAGTGAAGGTTGATTTTAAGTTGGAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	1.4e-303	uncharacterized protein LOC109834727
Swissprot	O64477.1	2.4e-218	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	7.1e-268	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	51.94	0.0	780		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04893	AT2G19130.1	799	349	17	11	785	9	796	51.94	0.0	780
AfisC3G04893	AT4G00340.1	770	410	22	34	774	27	778	40.65	6e-141	498
AfisC3G04893	AT4G21380.1	792	431	24	33	768	39	811	36.11	1e-132	470

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	180	119.0	7.7e-35
PF00954.17	S_locus_glycop	Domain	212	319	100.8	5.5e-29
PF08276.8	PAN_2	Domain	342	398	63.1	1.6e-17
PF00069.22	Pkinase	Domain	487	753	170.1	5.2e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005773	C	vacuole
GO:0004674	F	protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0051707	P	response to other organism
GO:0009875	P	pollen-pistil interaction
GO:0031625	F	ubiquitin protein ligase binding
GO:0044699	P	single-organism process
GO:0045087	P	innate immune response
GO:0046777	P	protein autophosphorylation
GO:0050789	P	regulation of biological process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network