result

Gene information

Detail information of AfisC3G05552

Location

Gene	Chr	Start	End	Strand
AfisC3G05552	chr3	989466089	989469026	-

Sequences

CDS

>AfisC3G05552
ATGGCGTTTTCAGGTACGAGTCCACTGAAAAGTTTTCTCCTCTTCCTCTTTTTCAACATCTCCTACGCATTAGATGATAGAATCACCCTTACTCAGTCCATTACTGGATCAGAAAAGCTCACTTCCAAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTCCATACCACTATCTCGGAATATGGTACAATCTTAATATCGTATCTCAACTAACTTCAGTTTGGCTTGCCAACAGAGAAACTCCCTTAACTAATATTTCCAAAACAAACTTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCACAACACTCAAAAAGTGGTAGCCATTCTTCTTGATACTGGTAATCTTGTACTAAGGGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCAACTCACACGTTATTACCGGGCGCGAAGATCGGACTAAACAAAGTAACCAAAGAGTTGCAAAGGTTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATTTTCAGCGATGAAGGCGATCGCAACGGTTCAAGTGAATACTTTTTGCTTTGGAACAACTCTGTAAAATATTGGGCCAGCGGCGCCTGGGATGGTCGAATTTTCAGTAAGGTCCCTGAAATGACCGTACATCCTCATGGCCAATTTGTTTATGTTTCCAACGACAGAGAAAATTACTACACGTTCACGATCAATAGCAACTTCCCACTCTTGTCTAGGTACGTAATGGACTTCTCTGGCCAGGTCAAGCGGGTTAATTGGGTGACCAACAGCAGTTGGAGCCCATACTGGACTCAACCCGAAAGACAATGCGACGTTTATGCTCTATGTGGTCCGTTCGGTGTCTGCAACGAGGTTGGTTTGCCATTTTGTAATTGTGTCAGGGGGTTTAGCGAAAATTCTCGATCAGATTGGGCTTTGAGAGACTGGACAGGAGGCTGTGTTAGAAATACAAAACTGGAGTGTGAAAGCAGTGGAAAGGGTGAAAAAGATCGGTTCTTTACGATGCCCAACACTAGAATGCCTGCTAATCCTCAAAGTGTACAAGCTGGAAGTGCTTCAGATTCTGATTGTGAGTCTAATTGCTTGAATAACTGTTCGTGTACTGCTTACACTTATAACTCTGGCAGTTGCTTTGTTTGGCATGGCCCTTTGCTTAATCTTCAAGATAGGTACAATGGTCCTAACGGAGGCGTTCTCTTTGTTCGTCTTGCCGCCTCTGAACTTCCTATTATACATAATAGCGAAACAGTTATGATCATTTCTGTAGTAGGCGGTGTTTTCGGTTTCTTAGTATTGCTCGTTGTTGCATGGTCGATGTGTTGTTGGGGGAAAAGAACTTTACGTAAGACAAACGTTGTAGAAGGTGGTTTGATTGCATTTTCATACAAAGAACTGCAACGGGCGACTAAGAATTTCTCGGAAAAACTAGGAGGAGGAGGTTTCGGATCGGTTTTCAAAGGAGCTCTGTCCAACTCGTCATTTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGAGTTAGACAAGGAGAAAAGCAATTCAGAACGGAGGTGAGCACAATAGGAACAATACAACATGTGAATTTGGTTCGACTTCGGGGATTTTGCTCCCAAGGTCTGCACAAATTGTTGGTATACGAGTACATGCCAAATGGTTCTTTGGATAGCAAACTGTTTAACAAAGATAATAGTTTAGATTGGAAAACAAGGTACCGGATAGCGCTAGGAACGGCACGAGGATTGACTTATCTTCACGACAAATGCAAAGACTGCATTGTGCATTGTGATATAAAGCCTGAAAACATACTTCTTGATGCTTCGTTTGTGCCGAAAGTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGAGATTTTAGTAGGGTATTAACTACGTTGAGAGGGACAATAGGTTATCTTGCTCCGGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCGGATGTGTACAGCTATGGAATGTTGCTTTTTGAGATAATTTCAGGTAAGAGGAATTTAATAAAACTGCAAGAACAGAAGATAAGCTATTTTACTTCACTAGTGGCGAGAAAAATGAAGGAAGGGGATGTGATGAGTTTGGTAGATGAGAAACTAGAAGGAGGAGAGATTTCGGGAGAGGAAGTTATTAGGGTTTGTAAAATTGCATGTTGGTGCATACAAGAAGAAGAAGACGATAGACCCTCGATGAATCAGGTGGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCGTGCCACCCATTCCGAAAATGTTGCATATACTTGCAGAGAATTCAGAAGGCACTGATTTATTTTCCGAGCTTTTTTTGAAGTAG

Protein

Gene

>AfisC3G05552
AATGTATGAGCTGATCGTCTAAATCTCTACATCAAATATTAATGGCCGAAAAGCCTTAACCTAGTCTCACTTTTACCTCTGAACCTTCATCCTTCTCAATTTATATATTAATGGCGTTTTCAGGTACGAGTCCACTGAAAAGTTTTCTCCTCTTCCTCTTTTTCAACATCTCCTACGCATTAGATGATAGAATCACCCTTACTCAGTCCATTACTGGATCAGAAAAGCTCACTTCCAAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTCCATACCACTATCTCGGAATATGGTACAATCTTAATATCGTATCTCAACTAACTTCAGTTTGGCTTGCCAACAGAGAAACTCCCTTAACTAATATTTCCAAAACAAACTTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCACAACACTCAAAAAGTGGTAGCCATTCTTCTTGATACTGGTAATCTTGTACTAAGGGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCAACTCACACGTTATTACCGGGCGCGAAGATCGGACTAAACAAAGTAACCAAAGAGTTGCAAAGGTTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATTTTCAGCGATGAAGGCGATCGCAACGGTTCAAGTGAATACTTTTTGCTTTGGAACAACTCTGTAAAATATTGGGCCAGCGGCGCCTGGGATGGTCGAATTTTCAGTAAGGTCCCTGAAATGACCGTACATCCTCATGGCCAATTTGTTTATGTTTCCAACGACAGAGAAAATTACTACACGTTCACGATCAATAGCAACTTCCCACTCTTGTCTAGGTACGTAATGGACTTCTCTGGCCAGGTCAAGCGGGTTAATTGGGTGACCAACAGCAGTTGGAGCCCATACTGGACTCAACCCGAAAGACAATGCGACGTTTATGCTCTATGTGGTCCGTTCGGTGTCTGCAACGAGGTTGGTTTGCCATTTTGTAATTGTGTCAGGGGGTTTAGCGAAAATTCTCGATCAGATTGGGCTTTGAGAGACTGGACAGGAGGCTGTGTTAGAAATACAAAACTGGAGTGTGAAAGCAGTGGAAAGGGTGAAAAAGATCGGTTCTTTACGATGCCCAACACTAGAATGCCTGCTAATCCTCAAAGTGTACAAGCTGGAAGTGCTTCAGATTCTGATTGTGAGTCTAATTGCTTGAATAACTGTTCGTGTACTGCTTACACTTATAACTCTGGCAGTTGCTTTGTTTGGCATGGCCCTTTGCTTAATCTTCAAGATAGGTACAATGGTCCTAACGGAGGCGTTCTCTTTGTTCGTCTTGCCGCCTCTGAACTTCCTATTATACATAATAGCGAAACAGTTATGATCATTTCTGTAGTAGGCGGTGTTTTCGGTTTCTTAGTATTGCTCGTTGTTGCATGGTCGATGTGTTGTTGGGGGAAAAGAACTTTACGTAAGACAAACGTTGTAGAAGGTGGTTTGATTGCATTTTCATACAAAGAACTGCAACGGGCGACTAAGAATTTCTCGGAAAAACTAGGAGGAGGAGGTTTCGGATCGGTTTTCAAAGGAGCTCTGTCCAACTCGTCATTTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGAGTTAGACAAGGAGAAAAGCAATTCAGAACGGAGGTGAGCACAATAGGAACAATACAACATGTGAATTTGGTTCGACTTCGGGGATTTTGCTCCCAAGGTCTGCACAAATTGTTGGTATACGAGTACATGCCAAATGGTTCTTTGGATAGCAAACTGTTTAACAAAGATAATAGTTTAGATTGGAAAACAAGGTACCGGATAGCGCTAGGAACGGCACGAGGATTGACTTATCTTCACGACAAATGCAAAGACTGCATTGTGCATTGTGATATAAAGCCTGAAAACATACTTCTTGATGCTTCGTTTGTGCCGAAAGTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGAGATTTTAGTAGGGTATTAACTACGTTGAGAGGGACAATAGGTTATCTTGCTCCGGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCGGATGTGTACAGCTATGGAATGTTGCTTTTTGAGATAATTTCAGGTAAGAGGAATTTAATAAAACTGCAAGAACAGAAGATAAGCTATTTTACTTCACTAGTGGCGAGAAAAATGAAGGAAGGGGATGTGATGAGTTTGGTAGATGAGAAACTAGAAGGAGGAGAGATTTCGGGAGAGGAAGTTATTAGGGTTTGTAAAATTGCATGTTGGTGCATACAAGAAGAAGAAGACGATAGACCCTCGATGAATCAGGTGGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCGTGCCACCCATTCCGAAAATGTTGCATATACTTGCAGAGAATTCAGAAGGCACTGATTTATTTTCCGAGCTTTTTTTGAAGTAGTACCTACATGACTGTATGGATCAAAAGCTTTTCTACTAGTTCCATGTATTGATATCTGAGATGGGTTTACTTAAGTATGTGTGGCTATAGTACACAAAATATGGATTTTGATTGTTGTCACTAAGCTTATTATTACCGTGTGTAATTGCTTGTATATGGTGTATGTTATTGTAGCAAAAGGTTTCCTATTCATTGTTCTTCTTTTTAGGAGGTTCTTGATGGAGGCATGTATAGCGGACGTAGATTTTAAGAAAAGCAAATCTTTTGTCCCCATTTCTTGAAAGTCCTATGTCCCCAATTCATCACAACCATCATTTACTTATCTACTATATTGATTAATTTATTTAATTATTAATTGCAGGGCTATGATGAAGTAAGCACATAAGAACACAGAGATTTGAGGATAAGTGGTTTTTACTAGATTTTAAGTTGGAGGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	3.8e-304	uncharacterized protein LOC109834727
Swissprot	O64477.1	3.0e-213	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	4.7e-264	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	50.99	0.0	771		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05552	AT2G19130.1	806	357	19	9	792	7	796	50.99	0.0	771
AfisC3G05552	AT4G00340.1	782	394	22	34	781	27	778	41.43	3e-144	509
AfisC3G05552	AT4G21380.1	795	428	21	33	775	39	811	36.86	1e-132	471

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	75	180	115.2	1.2e-33
PF00954.17	S_locus_glycop	Domain	212	320	92.3	2.4e-26
PF08276.8	PAN_2	Domain	347	407	57.6	8.6e-16
PF00069.22	Pkinase	Domain	494	760	161.8	1.8e-47

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0051707	P	response to other organism
GO:0009875	P	pollen-pistil interaction
GO:0044699	P	single-organism process
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network