result

Gene information

Detail information of AfisC3G05554

Location

Gene	Chr	Start	End	Strand
AfisC3G05554	chr3	989517564	989520456	+

Sequences

CDS

>AfisC3G05554
ATGGCGTTTTCAGGTACGAGTCCACTGAAAAGTTTTCTCCTCTTCCTCTTTTTCAACATCTCCTACGCATTAGATGATAGAATCACCCTTACTCAGTCCATTACTGGATCAGAAAAGCTCACTTCCAAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTCCATACCACTATCTCGGAATATGGTACAATCTTAATATCGTATCTCAACTAACTTCAGTTTGGCTTGCCAACAGAGAAACTCCCTTAACTAATATTTCCAAAACAAACTTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCACAACACTCAAAAAGTGGTAGCCATTCTTCTTGATACTGGTAATCTTGTACTAAGGGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCAACTCACACGTTATTACCGGGCGCGAAGATCGGACTAAACAAAGTAACCAAAGAGTTGCAAAGGTTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATTTTCAGCGATGAAGGCGATCGCAACGGTTCAAGTGAATACTTTTTGCTTTGGAACAACTCTGTAAAATATTGGGCCAGCGGCGCCTGGGATGGTCGAATTTTCAGTAAGGTCCCTGAAATGACCGTACATCCTCATGGCCAATTTGTTTATGTTTCCAACGACAGAGAAAATTACTACACGTTCACGATCAATAGCAACTTCCCACTCTTGTCTAGGTACGTAATGGACTTCTCTGGCCAGGTCAAGCGGGTTAATTGGGTGACCAACAGCAGTTGGAGCCCATACTGGACTCAACCCGAAAGACAATGCGACGTTTATGCTCTATGTGGTCCGTTCGGTGTCTGCAACGAGGTTGGTTTGCCATTTTGTAATTGTATCGGGGGGTTTAGCGAAAATTCTCGATCAGATTGGGCTTTGAGTGACTGGACAGGAGGTTGTGTTAGAAATACAAAACTGGAGTGTGAAAGCAGTAGAAAGGGTGAAAAAGATCGGTTCTTTGCTGGAAGTGCTTCAGATTCTGATTGTGAGTCTAATTGCTTGAATAATTGTTCGTGTACTGCTTACACTTATAACTCTGGCAGTTGCTTTGTTTGGCATGGTCCTTTGCTTAATCTTCAAGATAGGTACAATAGCCCTAATGGAGGCGTTCTCTTTGTTCGTCTTGCCACCTCTGAACTTCCTATTATACATAATAGCGAAATAGTTATGATCATTTCTGTAGTTGGCGGTGTTTTCAGTTTCTTAGTATTACTCGTTGTTGCATGGTCGATGTGTTGTTGGGGGAAAAGAACTTTACTTAAGACAAACGTTGTTGAAGGTGGTTTGATTGCATTTTCATACAAAGAACTGCAACGGGCGACTAAGAATTTCTCAGAAAAACTAGGAGGAGGAGGTTTCGGATCGGTTTTCAAAGGAGTTCTGTCCAACTCATCATTTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGAGTTAGACAAGGAGAAAAGCAATTCAGAACGGAGGTGAGCACAATAGGAACAATACAACATGTGAATTTGGTTCGTCTTCGGGGATTTTGCTCTCAAGGTCTGCACAAATTGTTAGTGTACGAGTACATGCCAAATGGTTCTTTGGATAGCAAACTGTTTAACAAAGATAATAGTTTAGATTGGAAAACAAGGTATCAAATAGCGCTAGGAACAGCTCGAGGATTGACTTATCTTCACGACAAATGCAAAGACTGCATTGTGCATTGTGATATAAAGCCTGAAAACATACTTCTTGATGCTTCGTTTGTGCCGAAAGTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGAGATTTTAGTAGGGTATTAACTACGTTGAGAGGGACAATAGGTTATCTTGCTCCGGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCTGATGTGTACAGCTATGGAATGTTGCTTTTTGAGATAATTTCAGGTAAGAGGAATTTAATAAAACTGCAAGAACAGAAGATAAGCTATTTTACTTCACTGGTGGCGAGCAAAATGAAGGAAGGGGATGTGATGAGTTTGGTAGATGAGAAACTAGGAGGAGGAGAGATTTCGGGAGAGGAAGTTATTAGGGTTTGTAAAATTGCATGTTGGTGCATACAGGAAGAAGAAGACGATAGACCCTCGATGAATCAGGTGGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCGTGCCACCCATTCCGAAAATGTTGCATATACTTGCAGAGAATTCAGAAGGCACTGATTTATTTTCCGAGCTTTTTTTGAAGTAG

Protein

Gene

>AfisC3G05554
AATGTATGAGCTGATCGTCTAAATCTCTACATCAAATATTAATGGCCGAAAAGCCTTAACCTAGTCTCACTTTTACCTCTGAACCTTCATCCTTCTCAATTTATATATTAATGGCGTTTTCAGGTACGAGTCCACTGAAAAGTTTTCTCCTCTTCCTCTTTTTCAACATCTCCTACGCATTAGATGATAGAATCACCCTTACTCAGTCCATTACTGGATCAGAAAAGCTCACTTCCAAAGGTGGTAAATTTGAACTAGGGTTTTTCAAACCAGGCAAATCTCCATACCACTATCTCGGAATATGGTACAATCTTAATATCGTATCTCAACTAACTTCAGTTTGGCTTGCCAACAGAGAAACTCCCTTAACTAATATTTCCAAAACAAACTTTGCAATCTCTGAAAATGGCAATTTAGTGCTTTCCAACCAAACAAACCCTCTTATTTGGTCCACTAACATCACTCACAACACTCAAAAAGTGGTAGCCATTCTTCTTGATACTGGTAATCTTGTACTAAGGGACGCATCAAATCCAAATATAACTCTATGGCAAAGCTTCGACCATCCAACTCACACGTTATTACCGGGCGCGAAGATCGGACTAAACAAAGTAACCAAAGAGTTGCAAAGGTTAACTTCCTGGAAAAATGAAGACGATCCTGCCCCTGGAATTTTCAGCGATGAAGGCGATCGCAACGGTTCAAGTGAATACTTTTTGCTTTGGAACAACTCTGTAAAATATTGGGCCAGCGGCGCCTGGGATGGTCGAATTTTCAGTAAGGTCCCTGAAATGACCGTACATCCTCATGGCCAATTTGTTTATGTTTCCAACGACAGAGAAAATTACTACACGTTCACGATCAATAGCAACTTCCCACTCTTGTCTAGGTACGTAATGGACTTCTCTGGCCAGGTCAAGCGGGTTAATTGGGTGACCAACAGCAGTTGGAGCCCATACTGGACTCAACCCGAAAGACAATGCGACGTTTATGCTCTATGTGGTCCGTTCGGTGTCTGCAACGAGGTTGGTTTGCCATTTTGTAATTGTATCGGGGGGTTTAGCGAAAATTCTCGATCAGATTGGGCTTTGAGTGACTGGACAGGAGGTTGTGTTAGAAATACAAAACTGGAGTGTGAAAGCAGTAGAAAGGGTGAAAAAGATCGGTTCTTTGCTGGAAGTGCTTCAGATTCTGATTGTGAGTCTAATTGCTTGAATAATTGTTCGTGTACTGCTTACACTTATAACTCTGGCAGTTGCTTTGTTTGGCATGGTCCTTTGCTTAATCTTCAAGATAGGTACAATAGCCCTAATGGAGGCGTTCTCTTTGTTCGTCTTGCCACCTCTGAACTTCCTATTATACATAATAGCGAAATAGTTATGATCATTTCTGTAGTTGGCGGTGTTTTCAGTTTCTTAGTATTACTCGTTGTTGCATGGTCGATGTGTTGTTGGGGGAAAAGAACTTTACTTAAGACAAACGTTGTTGAAGGTGGTTTGATTGCATTTTCATACAAAGAACTGCAACGGGCGACTAAGAATTTCTCAGAAAAACTAGGAGGAGGAGGTTTCGGATCGGTTTTCAAAGGAGTTCTGTCCAACTCATCATTTAGTGAGATGATAGCTGTGAAGCAACTAGAAGGAGTTAGACAAGGAGAAAAGCAATTCAGAACGGAGGTGAGCACAATAGGAACAATACAACATGTGAATTTGGTTCGTCTTCGGGGATTTTGCTCTCAAGGTCTGCACAAATTGTTAGTGTACGAGTACATGCCAAATGGTTCTTTGGATAGCAAACTGTTTAACAAAGATAATAGTTTAGATTGGAAAACAAGGTATCAAATAGCGCTAGGAACAGCTCGAGGATTGACTTATCTTCACGACAAATGCAAAGACTGCATTGTGCATTGTGATATAAAGCCTGAAAACATACTTCTTGATGCTTCGTTTGTGCCGAAAGTAGCGGATTTTGGAATGGCAAAATTAATAGGAAGAGATTTTAGTAGGGTATTAACTACGTTGAGAGGGACAATAGGTTATCTTGCTCCGGAATGGATATCTGGAGTGGCAATAACAGCAAAGGCTGATGTGTACAGCTATGGAATGTTGCTTTTTGAGATAATTTCAGGTAAGAGGAATTTAATAAAACTGCAAGAACAGAAGATAAGCTATTTTACTTCACTGGTGGCGAGCAAAATGAAGGAAGGGGATGTGATGAGTTTGGTAGATGAGAAACTAGGAGGAGGAGAGATTTCGGGAGAGGAAGTTATTAGGGTTTGTAAAATTGCATGTTGGTGCATACAGGAAGAAGAAGACGATAGACCCTCGATGAATCAGGTGGTTCAAATGTTGGAGGGTGTTATGGAAGTTAGCGTGCCACCCATTCCGAAAATGTTGCATATACTTGCAGAGAATTCAGAAGGCACTGATTTATTTTCCGAGCTTTTTTTGAAGTAGTACCTACATGACTGTATGACTCAAAAGCTTTTCTACTAGTTCCATGTATTGATATCTGAGATGGGTTTACTTAAGTATGTGTGGCTATAGTACACAAAATATGGATTTTGATTGTTGTCACTAAGCTTATTATTACCGTGTGTAATTGCTTGTATATGGTGTATGTTATTGTAGCAAAAGGTTTCCTATTCATTGTTCTTCTTTTTAGGAGGTTCTTGATGGAGGCATGTATAGCGGACGTAGATTTTAAGAAAAGCAAATCTTTTGTCCCCATTTCTTGAAAGTCCTATGTCCCCAACTCATCACAACCATCATTTATTTATCTACTATATTAATTAATTTATTTAATTATTAATTGCATGGCTATGATGAAGTAAGCACATAAGAACACAGAGATTTGAGGATAAGTGGTTTTTACTAGATTTTAAGTTGGAGGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258340.1	3.5e-294	uncharacterized protein LOC109834727
Swissprot	O64477.1	9.2e-207	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A6P5FFS0	3.0e-255	uncharacterized protein LOC109714840

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	50.50	0.0	749		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G05554	AT2G19130.1	804	349	19	9	777	7	796	50.50	0.0	749
AfisC3G05554	AT4G00340.1	785	377	22	34	765	27	777	40.89	5e-141	498
AfisC3G05554	AT4G21380.1	786	424	22	33	760	39	811	37.02	2e-126	450

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	75	180	115.3	1.1e-33
PF00954.17	S_locus_glycop	Domain	212	320	91.1	5.5e-26
PF08276.8	PAN_2	Domain	358	392	39.3	4.4e-10
PF00069.22	Pkinase	Domain	479	745	162.4	1.2e-47

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0051707	P	response to other organism
GO:0009875	P	pollen-pistil interaction
GO:0044699	P	single-organism process
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network