Detail information of AfisC3G07001


Location
GeneChrStartEndStrand
AfisC3G07001chr312551649271255180977-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273657.14.9e-151LOW QUALITY PROTEIN: protein IWS1 homolog 1-like
SwissprotF4ICK8.13.1e-118Protein SUPPRESSOR OF BES-1-D 1
trEMBLA0A7I8K0391.1e-147TFIIS N-terminal domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G32130.156.072e-145 512ATIWS1;HNI9;IWS1Transcription elongation factor (TFIIS) family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08711.8Med26Domain34538850.21.7e-13

Gene Ontology
AccessionOntologyName
GO:0000988Ftranscription factor activity, protein binding
GO:0032784Pregulation of DNA-templated transcription, elongation
GO:0005634Cnucleus
GO:0006325Pchromatin organization
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006406PmRNA export from nucleus
GO:0009742Pbrassinosteroid mediated signaling pathway
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0044267Pcellular protein metabolic process
GO:0044446Cintracellular organelle part
GO:0044763Psingle-organism cellular process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17498SPN1, IWS1; transcription factor SPN1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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