Gene information

Detail information of AfisC3G07009

Location

Gene	Chr	Start	End	Strand
AfisC3G07009	chr3	1256294451	1256294876	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020672048.1	4.4e-16	myb-related protein 305-like
Swissprot	Q9SDS8.1	4.3e-08	Myb-related protein 8
trEMBL	A0A8K0N8D7	1.3e-17	Myb-related protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G24310.1	84.38	1e-10	61.2	ATMYB71;MYB305	myb domain protein 305

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G07009	AT3G24310.1	32	5	0	2	33	93	124	84.38	1e-10	61.2
AfisC3G07009	AT4G13480.1	28	2	0	2	29	81	108	92.86	2e-10	60.8
AfisC3G07009	AT1G35515.1	88	42	2	2	76	87	174	37.50	6e-10	58.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	3	26	27.8	1.9e-06

Gene Ontology

Accession	Ontology	Name
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009651	P	response to salt stress
GO:0009682	P	induced systemic resistance
GO:0009686	P	gibberellin biosynthetic process
GO:0009723	P	response to ethylene
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009800	P	cinnamic acid biosynthetic process
GO:0009892	P	negative regulation of metabolic process
GO:0010090	P	trichome morphogenesis
GO:0010200	P	response to chitin
GO:0010439	P	regulation of glucosinolate biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0016036	P	cellular response to phosphate starvation
GO:0046686	P	response to cadmium ion
GO:0043565	F	sequence-specific DNA binding
GO:0048354	P	mucilage biosynthetic process involved in seed coat development
GO:1900384	P	regulation of flavonol biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network