result

Gene information

Detail information of AfisC3G07071

Location

Gene	Chr	Start	End	Strand
AfisC3G07071	chr3	1267670563	1267671879	+

Sequences

CDS

Protein

Gene

>AfisC3G07071
CCTCTTTTTCTCATAACAACTCTGCTCTTCAGAGCTCAATCCAAGTTCCCATAAAGGACTCGTCTTGTTTTCCTCCTTATCATTTTTCTTCAATATCAGAATCTAGTCTAGTATTACAATTTAGTTAGTTTGTAAAAAGCAAGCTCTTGGATGGAGGTTGTAGCAGCATACTCAGACTATTTCTCAACACAAAAATGGATTCTTGGTGAGAAAAAAAGTGGGAAATGGAGTGAAGAAGAAAACAAGATATTTGAGAATGCATTGGCACACATCGATTTCTCAACTCCTGATAGATGGGAAAGGCTAGCACAGCTACTACCAGGAAAGTCAGTAAGTGATATAATTTCTCATTTTAAGGATTTAGAAGAAGATGTTAATCATATTGAAGCTGGACTGATCCCTGTACCTGGATATAGTTCTTCTTCTTTCTCGTTCGAATTTGATGGGTTAAAGCAATCTTATAACTGTGTTACTGGGAAAAGAGGCAGGTTTTATGATCAAGATAGGAAAAAGGGGGTTCCATGGACTGAGGAAGAGCACAGGTATTGTTTATTCCCCTTCCTTTAAAATCATTGGTTCAATCAGTAGTTGAAAAAAAAAAAAAACACACACACACACACAGGGAGAAAAGAAAAAAGCTTAGAACTTTACAAGGTTGTTAGTACCCCTTATAACATCTGTTAATTTAATAACTACAGGCAATTCTTGATGGGTCTTAAAAAGCATGGAAAGGGAGACTGGAGAAACATATCACGAAATTTTGTGGTAACAAGAACTCCTACTCAAGTAGCCAGCCATGCACAAAAGTATTATAATAGGCTTAATTCAGGAGGTAAAGACAAGAAGCGTGCTAGCATTCATGACATCACGATTGCCAACTTAGTGGAAAATAGTAGTCGTCCTTCAGATTCAACCAAAGTAGCTGACTCAATTCAGATGAAGGGAGAAGCTGAAGCATGTAATAATGGATTCAAACAGCCATGCTATTCTGGTGCATATCCATCTGGAATAAAACTGGAGCATCGAGATTCATATAGAGGAGCATTTCATAGTTCAGTAGTTGGCCATCAGATGATGCTTATTTAGATATCGGAATTTTGTTGCTGATGAAATTCATATTGCTCATGTAAGAATCAAAATGAAATGTAGAAATTTTTTATGGATTTTTACTTGATGTACATATTCAAGAAATTGTGCTTGTTGTTTGCTCCGTCTGCACCATGCTGGTAATCAGGCAAACATGTGGTTTATTGTAGATGGTCATAGCTCGCTGACCCTTGTAATTTCTACTTATTTCTAGTTTAAGGTTTTATATAA

Functional annotation

Database	accession number	e-value	annotation
nr	QBM06253.1	8.6e-80	DIVARICATA 6, partial
Swissprot	Q8S9H7.1	3.1e-66	Transcription factor DIVARICATA
trEMBL	A0A482DHQ7	6.2e-80	DIVARICATA 6 (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38090.1	57.35	9e-66	246		Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G07071	AT2G38090.1	204	72	2	4	192	7	210	57.35	9e-66	246
AfisC3G07071	AT5G58900.1	224	81	4	1	205	1	223	54.91	8e-63	236
AfisC3G07071	AT5G05790.1	188	65	5	22	200	27	209	57.98	7e-56	213

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	24	71	30.3	3.1e-07
PF00249.28	Myb_DNA-binding	Domain	124	168	48.1	8.5e-13

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009723	P	response to ethylene
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009787	P	regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0010116	P	positive regulation of abscisic acid biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030307	P	positive regulation of cell growth
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:1901001	P	negative regulation of response to salt stress
GO:1901371	P	regulation of leaf morphogenesis
GO:2000469	P	negative regulation of peroxidase activity
GO:1905615

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network