result

Gene information

Detail information of AfisC3G07176

Location

Gene	Chr	Start	End	Strand
AfisC3G07176	chr3	1278986881	1278989131	-

Sequences

CDS

>AfisC3G07176
ATGGTATCCATGTTCCCAAATACCTTCTTCCTCCTCCTTATTTTCCTCTTTTCAAACCCCATAAACTCAATAAAAGATTCATTCATATATAACGGATTCAGCAACGCAAATCTGCATCTAGATGGCATAGCTTCAATCACACCTACTGGACTTCTTCAGATGACCAACAAAACTTTGAACAATATTGGACACGCATTCCATCCGCTTCCTTTCAATTTCAAGTCCGAATCCGGTAAAACACTTTCTTTCTCTGCCACTTTTGTCTTCGCCATTCGTTCTGATATTTCCGACCTCAGTGGTCAGGGCCTGGCTTTTGTCATATCTAAAACCACCGATTTATCAAATGACGTTCAAACTCCAAGTCAGTATATGGGGTTGTTCACTGTAAAGAATAATGGCAAATCTTCTAATCATGTGTTCGCAGTTGAACTCGATACCATACAAAACCCCGATTTTCAAGATATCAACAATAACCATGTCGGGATCGATATAAACAGCTTGACATCCATCAATTCCTCTGCCGCCGGCTATTATGACGATTCAAGTAGTTCTCTTCAAAACTTGACCCTCATCAGTGGTCAGCCTATGCAAGTTTGGGTGGATTATGATGGCGGTAAAATGAAATTAGACGTCACTTTAGCTCCTATGAATATGTCAAAGCCTAGCATCCCATTAGTATCCATCATGAATGATCTTTCTGCGGTGATGAATGGATCAATGTACATTGGTTTTTCTTCATCCAACGGTCCTTTCCGGACTTATCATTATGTCCTCGGATGGAGCTTCAAGATGAATGGTGTAGCCCAATCGTTGGACTATGCCAATCTTCCCCAACTTCCAGTTATAGAGACCCCAAAAAATTCAAACGCTTTGGCAATATGGCTTCCGATCACAATATGTTCATCTGTGGTAATCCTATTTGTCCTTGCTATACTCATAATAAGACGAAAGAGGAAATACGCAGAGTTGCTAGAAGACTGGGAGCATGAGTACGGTCCTCACAGATTCTCATACAAAGATCTCTTCCAAGCAACCAAAGGCTTCAAGGAGAAAGAGCTTCTAGGAACAGGAGGCTTCGGCAGGGTCTACAAAGGAGTTCTACCAAACTCAACCTTAGACGTGGCGGTCAAGCGAGTCTCCCATGATTCATCCCAAGGAATGAAAGAGTTTGTAGCAGAGATTGTAAGCATGGGCCAGCTTAGACATCGGAACCTGGTCCAACTCCTAGGCTACTGCCGAAGGCGAGGAGAACTTCTGTTAGTCTACGACTTCATGCCAAATGGCAGCCTGGACCGATTTTTACATGACCGGACCAAACCAACCCTGACCTGGGACCAAAGATTTCGCATTATCAAAGGAGTCGCTTCTGGTTTGCTCTACCTGCACGAAGATTGGGACCAGGTGGTAGTACATAGAGACATCAAAGCAAGCAATGTATTGTTAGACGGAGAGCTAAATGGCAGACTTGGAGATTTCGGACTAGCAAGATTATACGATAGAGGAGTTGATCCGCAGACAACGCACGTGGTGGGGACGATGGGGTACATATCGCCTGAGCTTGCAATGAACGGGAAGGCGACAACGGTGTCAGACGTGTACGCATTTGGGGCATTTTTGCTAGAAGTGGTGTGCGGGAGGAGGCCGATAGATACGCAGGCGGAGTGCGAGGAGATGGTGCTGGTGGACTGGGTGCTGGAGAAGTGGCGCAACGGTAATTTAATGGAGGCGATGGATGGACGGTTGAGGGAGGAGTACAATGCGTACGAGGTGGAGCTGGTGCTGAAGCTCGGGTTGCTGTGCTCGCATCCGATGCCTGCGGTCAGGCCCAGCACTAGGCTGGTCATGCAGATTCTTGATGGTGATGCTGAGCTGCCGGAGCTGCTTCCCAATGCGGCCAGCTATGATATGGTTTCCGTGTATCAGAATTTGGGTTTTGATAATTATATTCATTCCATGGTCTCGTCCACTTCTAGTGTTTCGGTTGTAACTGGAGTCAAGTGA

Protein

Gene

>AfisC3G07176
CTTAAGTTTGCAATGGTCCCTTGTAGATGGTTAGAGTTGCCTTTGATCTACATGTTTCTTTCTAAACTACAAACAATTCAGGCTTTCACACTTATCCCTATTCTTAAACTTCTTTTCTTTATTCTGATCCCCACTTCACTTTTGTAAACATGGTATCCATGTTCCCAAATACCTTCTTCCTCCTCCTTATTTTCCTCTTTTCAAACCCCATAAACTCAATAAAAGATTCATTCATATATAACGGATTCAGCAACGCAAATCTGCATCTAGATGGCATAGCTTCAATCACACCTACTGGACTTCTTCAGATGACCAACAAAACTTTGAACAATATTGGACACGCATTCCATCCGCTTCCTTTCAATTTCAAGTCCGAATCCGGTAAAACACTTTCTTTCTCTGCCACTTTTGTCTTCGCCATTCGTTCTGATATTTCCGACCTCAGTGGTCAGGGCCTGGCTTTTGTCATATCTAAAACCACCGATTTATCAAATGACGTTCAAACTCCAAGTCAGTATATGGGGTTGTTCACTGTAAAGAATAATGGCAAATCTTCTAATCATGTGTTCGCAGTTGAACTCGATACCATACAAAACCCCGATTTTCAAGATATCAACAATAACCATGTCGGGATCGATATAAACAGCTTGACATCCATCAATTCCTCTGCCGCCGGCTATTATGACGATTCAAGTAGTTCTCTTCAAAACTTGACCCTCATCAGTGGTCAGCCTATGCAAGTTTGGGTGGATTATGATGGCGGTAAAATGAAATTAGACGTCACTTTAGCTCCTATGAATATGTCAAAGCCTAGCATCCCATTAGTATCCATCATGAATGATCTTTCTGCGGTGATGAATGGATCAATGTACATTGGTTTTTCTTCATCCAACGGTCCTTTCCGGACTTATCATTATGTCCTCGGATGGAGCTTCAAGATGAATGGTGTAGCCCAATCGTTGGACTATGCCAATCTTCCCCAACTTCCAGTTATAGAGACCCCAAAAAATTCAAACGCTTTGGCAATATGGCTTCCGATCACAATATGTTCATCTGTGGTAATCCTATTTGTCCTTGCTATACTCATAATAAGACGAAAGAGGAAATACGCAGAGTTGCTAGAAGACTGGGAGCATGAGTACGGTCCTCACAGATTCTCATACAAAGATCTCTTCCAAGCAACCAAAGGCTTCAAGGAGAAAGAGCTTCTAGGAACAGGAGGCTTCGGCAGGGTCTACAAAGGAGTTCTACCAAACTCAACCTTAGACGTGGCGGTCAAGCGAGTCTCCCATGATTCATCCCAAGGAATGAAAGAGTTTGTAGCAGAGATTGTAAGCATGGGCCAGCTTAGACATCGGAACCTGGTCCAACTCCTAGGCTACTGCCGAAGGCGAGGAGAACTTCTGTTAGTCTACGACTTCATGCCAAATGGCAGCCTGGACCGATTTTTACATGACCGGACCAAACCAACCCTGACCTGGGACCAAAGATTTCGCATTATCAAAGGAGTCGCTTCTGGTTTGCTCTACCTGCACGAAGATTGGGACCAGGTGGTAGTACATAGAGACATCAAAGCAAGCAATGTATTGTTAGACGGAGAGCTAAATGGCAGACTTGGAGATTTCGGACTAGCAAGATTATACGATAGAGGAGTTGATCCGCAGACAACGCACGTGGTGGGGACGATGGGGTACATATCGCCTGAGCTTGCAATGAACGGGAAGGCGACAACGGTGTCAGACGTGTACGCATTTGGGGCATTTTTGCTAGAAGTGGTGTGCGGGAGGAGGCCGATAGATACGCAGGCGGAGTGCGAGGAGATGGTGCTGGTGGACTGGGTGCTGGAGAAGTGGCGCAACGGTAATTTAATGGAGGCGATGGATGGACGGTTGAGGGAGGAGTACAATGCGTACGAGGTGGAGCTGGTGCTGAAGCTCGGGTTGCTGTGCTCGCATCCGATGCCTGCGGTCAGGCCCAGCACTAGGCTGGTCATGCAGATTCTTGATGGTGATGCTGAGCTGCCGGAGCTGCTTCCCAATGCGGCCAGCTATGATATGGTTTCCGTGTATCAGAATTTGGGTTTTGATAATTATATTCATTCCATGGTCTCGTCCACTTCTAGTGTTTCGGTTGTAACTGGAGTCAAGTGAATTTTTTGTATATAGTGTGATTACTTTCTAAATCTGTATATTGATATATCTAGTGAATTTTTTTGTCTAAACCTAGGCTCTGATGATTATTTTTGTTTTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256343.1	4.2e-264	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	5.8e-210	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8ZUC4	1.3e-251	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	57.73	0.0	717	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC3G07176	AT3G53810.1	608	249	6	27	629	26	630	57.73	717
AfisC3G07176	AT2G37710.1	607	243	6	27	629	26	629	58.81	710
AfisC3G07176	AT4G02420.1	632	267	9	11	629	6	632	54.91	673

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	26	276	270.1	1.6e-80
PF07714.14	Pkinase_Tyr	Domain	350	612	155.1	1.9e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0050832	P	defense response to fungus
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress
GO:0090333	P	regulation of stomatal closure
GO:1900425	P	negative regulation of defense response to bacterium

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network