Detail information of AfisC3G08231


Location
GeneChrStartEndStrand
AfisC3G08231chr314631501861463150880-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_012836724.18.0e-20PREDICTED: zinc finger protein AZF1-like
SwissprotQ42430.11.2e-17WZF1
trEMBLA0A022RC175.8e-20Zinc finger protein ZAT10 (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G67450.150.532e-1784.0AZF1;ZF1zinc-finger protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain153946.52.2e-12
PF13912.3zf-C2H2_6Domain7710137.51.4e-09

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0008270Fzinc ion binding
GO:0009409Presponse to cold
GO:0009416Presponse to light stimulus
GO:0009737Presponse to abscisic acid
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0042538Phyperosmotic salinity response
GO:0043565Fsequence-specific DNA binding
GO:0048235Ppollen sperm cell differentiation
GO:0048731Psystem development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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