result

Gene information

Detail information of AfisC3G08613

Location

Gene	Chr	Start	End	Strand
AfisC3G08613	chr3	1532994865	1532998579	-

Sequences

CDS

>AfisC3G08613
ATGTCCATCGAGAGTTGTGGAGGAGCATCATTCAAAATCTCGTTTACTTTCTACACAGACAAACAACATGCATACCGTGGCCATCCTAAATACTTCGTAAACTGCACCAACAACACTGCCCTTACAATTGCTGTCTTCAATAAAGAGTACCAGATAAAATTCATTGATTACAACAATAACCTCCTCAACATTGTTGACTACATTATATCTTCCGAATCATGTCCAAAATATTTCCCAAACTCTACTATAGACTTGAGTCTCTTTCAGTTTTCTGAAGAGTATAATCGCAACCTCACCATATACACCAACTGCAATGCAACAGTTACACCTAATCAAAACCTAACTAATTACAAGTGTTATGAAGCAGATGGTGGATTGGTAAATCAGCAGATATACTTCAGTCTTGATCATAGTAATAAAGGTGATACCCATGGATTGTGTAAATCAATGTCTGAGATTCCAGTGGATCAAGATACAGCTGATAAATTGATAAATGAGGAAATAGGGCCCGATCAAGCTGTGCACCAAGGATTCTACGTCAAGTGGACTGCAGGTGTAGATTGGTGCAGAGACTGTAAAAATTCTGGGGGTTATTGTGGTTCTAATTCTACCAAAGCTGATGGGCATATTTGTATATGCCCTAATGGAACTTTTACAGGTATTTGCATTGGTTCAGCAGCTTTTCTGATAATGGGTATTGTCCTCATTCTTATGCTTCGCACCCCTAGAAGAATTCTCAAAACGTTCTACCATAAAAGGAAAACAAATCATGAACAAAAAATTGAATCTTGCTTAGAGATATGTGGTTCTCTGGCTACAAAATGCTACACATATTCTAATGTAAAGAAAATGACAAGCTCCTTCAAAGAAAAAATTGGACAAGGCGGTTATGGTAGCGTTTACAAAGGTAAACTTGCCAGTGGGCATGAAGTAGCCGTTAAAATTTTGAGTGAAACAAAAGAAAATGGTGAAGACTTTATAAACGAGGTAGCAGCTATTGGAAACGCTTATGGAGAAATTAGCAGATATCAATTTGTGTACATATTTAATAGATTGTTGTTTCCCGCCCCAAAGCAGTCTGTCATTATCAGAACTTAA

Protein

Gene

>AfisC3G08613
ATGTCCATCGAGAGGTGAGTTAACTCACCAAAGCTCTAGCTAATGCTTACGTGTTCGATTTTAAAAGTTTGATTTTAGATTAAAATCTCACTTGCTCCAAACTTAACGAAATTAACTCCAACACGTAGATAACGCTCCTACGAGTGCAACGCAAAAGACCGTGTCATGATTGGACCTCGTATGGAGAAGATATGAATTTTATAAGATTTTGAATAAAATAATTTAATTAAATCAACTTACTTACTTAATTAAGTTAATTACCCACTACTACAAAACATGCCATTTGCATCGGTTGTTTACCCCCCTTTTGCATCAGTTCAACAACCGATGCATATGCAACCGATGCAACAGGCTTAACACTTTTGCATCAGTTCTGAAACCGATGCAAAATGGTCCTTTTTGCATCGGTTGTTACTAACAATTGATGCAAAATATCATGGTTGGTAGCTTAAACACAACCCCCATGTTGCATCGGTTGTAATGAAAACCGATGCAAACTAATCCCTCTATTGCATCAGTTTTTTATAACAACCGATGCAAACTAATCCCTTTATTGCATCAACTATTTATACCTAATGCAAAAAAGCCATTCTCAGAAACCATTATTACAATACTCAAACAGACTTTATATATATTATTAATTATAACAAACAATTATTGCATGCAATATTACAATTATTCAAAATAAAAATTGATGGCAAATACATAATCAGGTTTAATAATCGACAAAAGAATGAAAAACATAAATAAATTCCACAGTACATAATCAGAAAGTCAGTAGTAAAAAATAAATGCAGTGTGTTATATGTAGACACACAAAAATACATATATATACAGAGAAGAGAATGTATCATTGACAGTGGATAAATTAAGTAGATGGTATTCAAATGCACAAACCTTCATCCTATTTTGTACTTGAGCTACCTAAAGTTGAGCTATGCAATCTGCATATGCATATGATCCTACGTAATACAAACTGTGGTTAGCCAGAATAGATTGCAAGCATGTTGATTGATCTATTTTATTAATAGTATATTGGACATATGCCACATTTTAACCTTTTTAATAGTATTAGCATCATCTTCATTCTCTTGTTTTTCAAAAAACTCCTCAACATATGCCAATTGCAATTCTCCTCCATTCAGTTGTGGAGGAGCATCATTCAAAATCTCGTTTACTTTCTACACAGACAAACAACATGCATACCGTGGCCATCCTAAATACTTCGTAAACTGCACCAACAACACTGCCCTTACAATTGCTGTCTTCAATAAAGAGTACCAGATAAAATTCATTGATTACAACAATAACCTCCTCAACATTGTTGACTACATTATATCTTCCGAATCATGTCCAAAATATTTCCCAAACTCTACTATAGACTTGAGTCTCTTTCAGTTTTCTGAAGAGTATAATCGCAACCTCACCATATACACCAACTGCAATGCAACAGTTACACCTAATCAAAACCTAACTAATTACAAGTGTTATGAAGCAGATGGTGGATTGGTAAATCAGCAGATATACTTCAGTCTTGATCATAGTAATAAAGGTGATACCCATGGATTGTGTAAATCAATGTCTGAGATTCCAGTGGATCAAGATACAGCTGATAAATTGATAAATGAGGAAATAGGGCCCGATCAAGCTGTGCACCAAGGATTCTACGTCAAGTGGACTGCAGGTGTAGATTGGTGCAGAGACTGTAAAAATTCTGGGGGTTATTGTGGTTCTAATTCTACCAAAGCTGATGGGCATATTTGTATATGCCCTAATGGAACTTTTACAGGTTCCTGTTATTCAAGTGATCTGGACTAAGGTATGTTTTGCAGTTAAAATTTTCTCACTGGGTTCTAGACATCAGTACAGTTTTGATTTGTATAATCTGACTGCGGGAAGAAAAGGACAAAGGAGAAAGCTGATAATAGGTAACCTCAATAGTTGTGGTTTTCATATCAAAGCACATATTCTACTTGTATGTAACTTAAATCTTCACGTTAAAGAATTTAACTTATTTCCCAACCAAAGCAGGATCCTCAATTACTGGACCCTCAAATATAACTCATAAATTGAAGCTTTCTGGTTGTAGGTAATTTCATGTAAATCTTTAATACTGTTAGTCCACTTGAATTCACTGTAACTTCTATGCTCAATTTGAAATGATATACTAAACTTGAAATACCTCTCCAAAAATATGAAATTCACTTCTGCAGTAGAATTAAGACTAGAGGGACCATTATAGTACAATACTACATAACTGATAGAGCATAGTCAGACTTGAATAACAAGTATATAGGTAGGACTGAAACAGTTATTATACTTATTTTGTATTTTAATGTTAGAGCTGGATATCAACCAATATCAAACAGAGTATTAATTTCGCTCAATTTATCCCAATGTCAAGAAAAAAATTAAAACAATCTGATGATATGGCATCAACATCATCATCATAGCTTTTCTTAAAATAAACTGGGGTTGACCATATGAATTATTAATATCCATAATTTTCTATCTTCAGTAACATATTTATAGTTAAATTTAATATAAAGCGTTATTAATACGTTCATCCTAAGTTAAATTTAGACTGTTTTTTTTCAATATAAATATTAAAACCTCCTCTCCTTACCAATGCACCACTTCATCTTTTTTGTATGCATTCACTCCATCAATGTTCATTTTCTTTAACTTTTCATATGTAAGTGACACAATCAGTTTCTCTCATTCTTAACATTTTTAATCTATCTTTTTTTATAATTTCAATATCTTCCGTAGCATATTCTATTTTCTCACATATTTACTTTATTTTCTTTTTTACTTTTTAAAATGTTAACGTTCAACTCTGTACAATACAGTAAGTTTAACTATTGTTCCAAAAAAAAACTTTTTGTTTGCTACTATTATCCTATCACATCAAAAAACACTAGTTTGTTCACTTTATCCAACTTGTATAAATTCTATTTATTATATCTTTTTCTACATCATCTTATATTATTGAATGATCATATTTTAAACATTTTTGTTAATCATTTGACCTTGTATCGTCTCTGATTCTTATACTGAAATTGCTTAACATATACTATGTTGTATGACATAATCGTACGAATATAGTCCTTGCATGTAATATTATAGTATCTCTCTTGTTATCAATACACACATATACTATAGCATGTATGAGTATACAGTTTAACATAAATAATAAATGGACCATTAGGTGTGGTTTTTGTTTCATCTTTTATTTTACTAAGTAAAAGGAACTTTTGTTTTTTTATCGACAGGTATTTGCATTGGTTCAGCAGCTTTTCTGATAATGGGTATTGTCCTCATTCTTATGCTTCGCACCCCTAGAAGAATTCTCAAAACGTTCTACCATAAAAGGAAAACAAATCATGAACAAAAAATTGAATCTTGCTTAGAGATATGTGGTTCTCTGGCTACAAAATGCTACACATATTCTAATGTAAAGAAAATGACAAGCTCCTTCAAAGAAAAAATTGGACAAGGCGGTTATGGTAGCGTTTACAAAGGTAAACTTGCCAGTGGGCATGAAGTAGCCGTTAAAATTTTGAGTGAAACAAAAGAAAATGGTGAAGACTTTATAAACGAGGTAGCAGCTATTGGAAACGCTTATGGAGAAATTAGCAGATATCAATTTGTGTACATATTTAATAGATTGTTGTTTCCCGCCCCAAAGCAGTCTGTCATTATCAGAACTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_017701632.2	4.6e-63	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1
Swissprot	Q3ECH2.2	4.2e-21	Probable receptor-like serine/threonine-protein kinase LRK10L-2.8
trEMBL	A0A8B7MWX6	2.5e-63	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G67000.1	28.32	8e-24	108		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08613	AT1G67000.1	346	189	16	27	333	279	604	28.32	8e-24	108
AfisC3G08613	AT1G67000.1	204	145	6	2	204	36	224	21.08	2e-06	50.4
AfisC3G08613	AT5G38260.1	318	209	10	27	333	62	368	27.36	1e-23	107

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF14380.3	WAK_assoc	Domain	138	216	48.2	1.3e-12
PF07714.14	Pkinase_Tyr	Domain	288	333	21.6	9.8e-05

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0002229	P	defense response to oomycetes
GO:0002237	P	response to molecule of bacterial origin
GO:0042742	P	defense response to bacterium
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0006968	P	cellular defense response
GO:0009506	C	plasmodesma
GO:0009620	P	response to fungus
GO:0009626	P	plant-type hypersensitive response
GO:0010150	P	leaf senescence
GO:0042578	F	phosphoric ester hydrolase activity
GO:0044710	P	single-organism metabolic process
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network