result

Gene information

Detail information of AfisC3G08725

Location

Gene	Chr	Start	End	Strand
AfisC3G08725	chr3	1550640194	1550641340	-

Sequences

CDS

Protein

Gene

>AfisC3G08725
ATGCAATACTTTAAAATCAGAGTGTTTTTTGATGATATCATATGCATTTTAACAGGTGAAAAACATGGCACTTTAAACTGGAAACAAAGATTTGATATAATAGTAGGAATAGCAAGAGGGATTGCTTATCTCCATCAAGAATTTCATGTCACGGTTATACATAGAGATATAAAATCTAGCAATATATTACTAGATGATGATCTTCAGCCAAAAATTGCAGATTTTGGTCTTGCAAGGCTTTTACCTAGTGATCAGACTCATGTCAGTACCGAATTTGCTGGAACTTTGTATGTCAAAATTTACATTTGTTTAATTTCACATACCATTTATGTATATATGCCTTTTTTTTATATCAATGTGTAAATTTATTATATGAATGCTATGACAGGGATACACAGCGCCTGAGTACGCAATCCATGGCCAGCTATCTGAAAAGGTCGATACATACAGTTATGGCGTAGTTCTCTTGGAAATAATTAGTGGGAGAAAATCGAATGATCCAAGGCTTGAACTTGAATACCAGTACCTACTTGAATGGGTAATCTCTCTAATATGTTGCTGAAATTAGTACCTACTTGAATGGGTAATCTCTCTAATATGTTGCTGAAATTACTACATTGACATTAGTTTCATCTACATGATATAATATGAACAATTTTTTTATTTTCACAACTCTAGTCAAAACATATTTTTTTAAGTAGGAAGTGCAGAAGCCTTAATCATGGTTGAGGTCTAAATTGGATTTGGATCATATGCTCTTTATTTGCACCAAAACAGGAAAACTAGTACCTGAATGGTTCACCACACTTGGTACTGAAAATGTACTAACTTTGCTAACATGTATCAAATGTGCACAAATGAGAGTTTCTCAACTTTGGTAGAATACTGGAGTAGGTGATCCAAATCCGTATAAACTAATTAATTTATCTTGATGCATGTTAAGGGCATATGCATAGAAAGATTCATTTTTTTATAATGATTGGTTGAATAGGCATGGAGATTATATAAGAGCCGTGAATTAGTAAAGTTAGTAGATGAATCTATGGATCCTAACGAATTCAATGAAGATGAACTAAAGAGAGTGATTGAAATAGCTCTACTTTGCACTCAGTCTATAGTAGTTGCAAGGCCAACTATGTCGGAAGTC

Functional annotation

Database	accession number	e-value	annotation
nr	OAY63521.1	6.7e-74	Cysteine-rich receptor-like protein kinase 2
Swissprot	C0LGH3.2	2.6e-46	Probable LRR receptor-like serine/threonine-protein kinase At1g56140
trEMBL	A0A6P5FJM1	4.8e-74	cysteine-rich receptor-like protein kinase 2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G56120.1	51.10	5e-49	190		Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G08725	AT1G56120.1	182	78	2	17	189	795	974	51.10	5e-49	190
AfisC3G08725	AT1G16670.1	174	72	2	25	189	138	310	52.87	2e-48	188
AfisC3G08725	AT1G56140.1	182	79	2	17	189	778	957	50.55	2e-47	185

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	21	123	87.5	8.6e-25

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0042742	P	defense response to bacterium
GO:0005773	C	vacuole
GO:0004674	F	protein serine/threonine kinase activity
GO:0005516	F	calmodulin binding
GO:0012501	P	programmed cell death
GO:0009506	C	plasmodesma
GO:0009737	P	response to abscisic acid
GO:0009751	P	response to salicylic acid
GO:0010150	P	leaf senescence
GO:0010193	P	response to ozone
GO:0043167	F	ion binding
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network