Detail information of AfisC4G00505


Location
GeneChrStartEndStrand
AfisC4G00505chr48290761382913600-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010928453.17.7e-64ribosome biogenesis protein BRX1 homolog 1 isoform X1
SwissprotQ9C928.11.3e-60Ribosome biogenesis protein BRX1 homolog 2
trEMBLA0A6I9RUH65.5e-64ribosome biogenesis protein BRX1 homolog 1 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G52930.179.846e-61 231Ribosomal RNA processing Brix domain protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04427.15BrixDomain210764.11.7e-17

Gene Ontology
AccessionOntologyName
GO:0000027Pribosomal large subunit assembly
GO:0005829Ccytosol
GO:0005730Cnucleolus
GO:0006364PrRNA processing
GO:0032501Pmulticellular organismal process
GO:0044699Psingle-organism process
GO:0044822Fpoly(A) RNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14820BRX1, BRIX1; ribosome biogenesis protein BRX1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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