result

Gene information

Detail information of AfisC4G00527

Location

Gene	Chr	Start	End	Strand
AfisC4G00527	chr4	86639633	86643172	-

Sequences

CDS

Protein

Gene

>AfisC4G00527
ATGCAAAACCCATGGGTTGTACTTAACACCATGGAAGAACATGAAAACAGGACCATAGTGACAGCACCGACCCACATCTTATCCTGCACTGTACCCGAAGCAGCCGGTGCATCAACATCGTATTCAGGTCCCATTGTCCTGCAAGCAGTGGCCTGCACTCAATGCTGCCTTTTCAACTGCAACGGCTGTGATCTGTTCACCGACTCTTTTGAAACGGAATCTAGTGCTAAGCAGAGGAGGGTGAAGAACAGGTTCAGGGGGTGAGGCAGAGAAAATCGGGTAAGTGGATAGGAGAGATATACGACCCTCCAACAAAGGGAAGGAAGCCGCTTGGCACCTTAATTTGCCACTGTAGAGGATGCGGCTAGAGCTTTAGATCAGGCTGCAATGCAGTTAAAAGGTGCTGCTGCCAAGCTCAATTTTCCACTCTCCACTCATATAAGGTTGACCCTAGAGATGTTATAATGAGATGTTATAATGAGTATTCTACTTGAATAAAGTATCACTTTTGTAATCATAATTGAAAAAATTAATCTAGCCGTTTTATTATTAAATAAGTTTAAATATTGAATTATTACATAAAGCAATCACAACAAATTTGAAATTATACAAGAAATTATAACAATAAATAACTTTTACTAACAAATTGGGAATGATGTAGCAAATTTAAACAACAATGCCCTAAATCATTTAGTAATAAGTTATTTAATGTTGTGCAAAAATTGCACAAATGCGGAAAAACAATAAACATGATCTAGATTTGCCAATTTGAACATCACTTAATCTAGCATCAATTATTCTATACTCCAAATAAATAGTAAATAACTATAAAAAAAAGACACACAAAATTTATACTGGTTCCACTATCATCTAGATATTGTACGTCCAGTCCAAAGAAGAGAGATTTTATTACATTTGAGAGAATTACAAAAAAATTACAAAACAAGAGTTTACATACCAAGTCCCAAATTAAGGATAATAAGAAGAGACACTCTATCTGGAGATCGCTGGCTGAATGTCAGGATGGGTTTACAATGAAGTCTACCCTCAATATATAGCCAATATAAATTCATGTGAGTCATCAATCAAATTACCAAAATATGATAAGAAGATAATGGAGGCAAATTACAATGGTAACAAATCACGCAAACATAGCAAGTAATTCACTCGTTCCAAAGATGGAAGAAAATAATCCCAAAGCAATGCGATTACGAAGAAAGAAATAATATGCATATCTTTTGCATATATATTATTCCATAACGTGCGCATGCATAAAATTCCTTGTCATCTCATTCAAATGCAATCCAATTATTAATGCATTTCCATAATGAACAAACGTGATTACTTTTCCTTTTGCATATTTGTTTCCTTCTATTTGTGATTTTGTATCACCAAAATTTAACATTTAATGTGTGCAGTTTCTATCTTATAACAACTAACTAGGAATCATAAGAAAATTTAGAAAATCTATTGCATACAAAAAATAATGTACCTTTTATTGATCACAAGATGACATTTGGTTTGAAAACTAGTTTTGTGTTTCTAACATGTAGTTTAAAATGCATGGAGAGTAAAAAGAAGTGCAAGACTGTCAATTTGAAAAATAATTTTAACATCTAAAAATAAAAATGACTTTTCTTTTGGTCTTTTAGGAAATATGAAAAATTGTCCTCTTTCTTCTTCTTTCTTCTTTGTTGGAATGTGTGAGATTTTCCAATCCATTTTTCTCTTTCGCGCCATTTGACATATATGTTGAAATGCAGTACAAAACTCCTCTTCAAGTCAAACATTGCCAAAGATTATTCTAAAACAATCTATTATAGATTCAACAATAATGGATGAAGCAACTTGAAGAACAAATTTTGGTCACGAAGAGTGGATATAATTTCAAAGGGAAATATGGCAAAATATTATATCATGCCTTTGTGATTTTTTTGTTATGTTTTTTCAATTTTTACGTTGGGGATTGGACGAAATACTTCACTCGGCTCGTATAAGTAAGGTTAAAGATAGTTCCATCAAACTCGACCTTACATGAGGTAGGGTATAGATCGAGTTGAATTATGGGTTAAGGCGTATAAACCTAATAATAAAAAAGAGACTTTTGAAAAAAAAGAGCCAAAATAACATATTGAAATATTACTTAAAATAGTAGATTTTAGCTATCATTAAGCCTTAAAAAGAAGTGATTCACTGCAACCCATGTTTCATTAGAATTTCATAACAAACTACATCATATAGAATTTATTCATTACATACTTAATTAAAAGTTTCATTTTAAAGAAATTAAAATGCTCTTAGAATATTCATCAAAATTTGCAATCAACCATATGGGTTTTGGCTATTTCAATTTTTTTCGAACTGACATCGAATATGATTTTTTAAGTAAATTTGTTCAATTATATTTATATTTTATTTTAGATTTTGACGGCTACTTTAACGGGATTTAAATATATATTGAATTAGTTTCTTTAAAAGGATTGGGTTTGATTAAAATATGATTGAGTTGAATAAAATATCAAACACGATTCGTATCCAGTACGTGTCCACCCCAACCATTAACCTAGTTATGTCACTGCTTACGGCAAAACCCAACTGTTCAATTGGAAACAGGATAGTGAAATGACGCAGTTGATACACGAAACAGCAAATGCGTCCGAATGCCTCCAAAATTGTAATGGACCACGACTGCGAAAACATCGGAAGGCACAGCTATCTGAAGAGGCCCCACAGCAAATAATCGGCTTCTAGAAACAAAACTAACAATAACTGAAGTGAGGTCCACAAGTATTCAAACTAACAATAACTCGGCGTCAACTCTCCAAATTTATACATTCGAAACATCCCGAACGTAAGCTCACTTGCTAATGTCAGCGTCGTACGGTCGCTTAAAAGTAGTTGTTCAGCCAAATACTACAGCTGGCATGCCTCTCTATATATACATACGCCCACTCTCTTGACTTCAAACTCTTTTTTTTGACTTGTTTAAAACCTCTGGACCGCAGTCGGAGCATGCAAAACCCATCAGTTGTGCCTAATACCGTGGAAGAGCATGAAAACAGGATAATAGTGGAAGCACTAATCCACGTCTTATCCGGCACAGTACCCGAAGCGGCCGGTGCATCAACGTTGTATTCCGGTCCCATTATCCTGCCAGCAGTGGCCTGCACTCAGTGCTGCCTTTTCGACTGCAACGGCTGTGATCTGTTCACCGACTCTTTTGAAACGGAATCAAGTGCCGGAAATGGCCGGGTTAAGCAGCGGAGGAGGGTGAAGAACAAGTACAAGGGAGTGAGGCAGAGAAAATTGGGAAAGTGGATAGCAGAGATATACGACCCTGCAAAAAAGGGAAGGAAGTGGCTTGGCACCTTCGCCACTGAAGAGGATGCAGCCAGAGCATTTGATCAGGCTGCAATCCAGTTAAAAGGTGCTGCTACCAAACTCAATTTTCCACTCTCCACCCACAAGGTCGATGCTTCTGCTGCTCCTCAACTTACTTTGGAGCAGCACAGTCAGTCTTCAGATGGGGCCGTCAGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	PKU79909.1	3.7e-24	Ethylene-responsive transcription factor ERF109
Swissprot	Q9LUM4.2	6.7e-15	Protein RELATED TO APETALA2 2
trEMBL	A0A2I0WW74	2.6e-24	Ethylene-responsive transcription factor ERF109

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G47520.1	52.63	1e-17	86.7	AtERF71;ERF71;HRE2	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC4G00527	AT2G47520.1	76	36	0	151	226	43	118	52.63	1e-17	86.7
AfisC4G00527	AT2G22200.1	74	32	1	153	226	66	138	55.41	2e-17	86.3
AfisC4G00527	AT1G72360.3	103	45	3	121	214	32	130	43.69	7e-17	84.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	157	206	39.4	4.8e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005730	C	nucleolus
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009749	P	response to glucose
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010143	P	cutin biosynthetic process
GO:0010166	P	wax metabolic process
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0034059	P	response to anoxia
GO:0043565	F	sequence-specific DNA binding
GO:0051301	P	cell division
GO:0071456	P	cellular response to hypoxia
GO:0071497	P	cellular response to freezing

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network